Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01878 ATGGAGGCAGAACATCATCAAGAAGCCTCAAACGCTATTGGAAGCCTTTACGTTAAAGTGATGACCGACGAACAAATGGAACTGCTGAGGCAGCAGATATCTGTCTACGCCACCATCTGCGAGCAGCTTGTTGAGATGCACAAAGCCGTTACCTCCCAACAGGACCTCGCAGGGCTGAGGCTGGGTAATTTGTACTGTGATTCGTTGATGGCGTGTTCTGGACACAAGATAACTGCGAGGCAGCGTTGGACTCCAACGCCTCTGCAGCTTCAAATTCTGGAGCGTATTTTTGATGAGGGGAATGGCACTCCAAGTAAGCAGAAGATCAAGGAGATAACCATTGAACTGGGCCAACATGGCCAAATATCAGAGACAAATGTTTATAACTGGTTCCAGAACAGAAGAGCTCGATCAAAGAGGAAGCAACTCGCTCCCGCATCGAATGTTGAGCCAGAAGCCGAGACAGAAGTTGAGTCTCCACGAGAGAAAAAGATACGCGCCGAAAGCGTTCAGGTTATTCAACCCTTTGAGAATTCATCATCACCTCATAGGATCAAGGATATGTACATCCACAGTCCTGACTTAGGATTTGAGCAATTGATGAGTAAAATTGAAGTTGCAGGGTGTTACAGCTCTTATTTTCTTTGA 648 0.4645 MEAEHHQEASNAIGSLYVKVMTDEQMELLRQQISVYATICEQLVEMHKAVTSQQDLAGLRLGNLYCDSLMACSGHKITARQRWTPTPLQLQILERIFDEGNGTPSKQKIKEITIELGQHGQISETNVYNWFQNRRARSKRKQLAPASNVEPEAETEVESPREKKIRAESVQVIQPFENSSSPHRIKDMYIHSPDLGFEQLMSKIEVAGCYSSYFL* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01878 215 CDD homeodomain 80 142 IPR001356 GO:0003677
Phac9g01878 215 PANTHER WUSCHEL-RELATED HOMEOBOX 13 6 198 IPR044559 GO:0003700
Phac9g01878 215 ProSiteProfiles 'Homeobox' domain profile. 76 141 IPR001356 GO:0003677
Phac9g01878 215 SUPERFAMILY Homeodomain-like 79 142 IPR009057 -
Phac9g01878 215 MobiDBLite consensus disorder prediction 139 163 - -
Phac9g01878 215 SMART HOX_1 78 145 IPR001356 GO:0003677
Phac9g01878 215 Gene3D - 81 145 - -
Phac9g01878 215 Pfam Homeodomain 80 140 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01878 Phac-Chr9 17776071 17777591 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01878 16 170 Wox Gene Family AT4G35550 69.375 3.45e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phac9g01878 Homeodomain 5.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01878 - - pvu:PHAVU_009G012200g 420.624