Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01857 ATGTCCACAATGCTAAAATCAGGCATGAAAATTGATGAGAAAAAGCAGGTGAAGAAAACAGCACAGGCCAGCTCCAGAAAGGGGTGTATGAGAGGTAAAGGAGGTCCTGAGAATGCCAGTTGCACCTACAAAGGTGTGAGACAGAGAACCTGGGGGAAATGGGTTGCTGAAATCCGTGAACCCAATCGTGGTGCAAGACTCTGGCTCGGGACATTCGAAACCTCTCATGACGCTGCTTTGGCTTATGATGCTGCAGCACGTAAGCTTTACGGCCCTGATGCCAAACTCAATTTACCAGACCTCACTGTGCCCCCAATGAAACCATCTCAGTGTCCACCACCACATCCTGATATCAACACTCAAACTCCTGAAATGGAGAACCTGCAACAGATGCAAAACAACATAGACACGGCAACTTGTTCTAATTTCAATTTCAATCCTGCAGTTTCCATGGCCTCTCAGGAAGTTGGAGTTACTCCAATTTACACCAGTGATTGCATAGTGTCTCTTCCCTTAGACACCAATCCTAAGCCAATTGAATCCTACACAAAGCCTGGGGGGATCGAGGGGGAGTTTTGCCCTTCTTGGGAGACAATGAACGAGAGTTTACCCGTTTTTGATGATTCTATCTGGGCCGAAGCTGCTATGTCTCTGGATTTTCCTCTAATTGCAGCAGAGACTGAGATTTACACACCGGAGAACACCTTGGCAGATGTGGCTATGTGGGACCCTCAAGCTCCATGGTGCATGTAA 753 0.4741 MSTMLKSGMKIDEKKQVKKTAQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFETSHDAALAYDAAARKLYGPDAKLNLPDLTVPPMKPSQCPPPHPDINTQTPEMENLQQMQNNIDTATCSNFNFNPAVSMASQEVGVTPIYTSDCIVSLPLDTNPKPIESYTKPGGIEGEFCPSWETMNESLPVFDDSIWAEAAMSLDFPLIAAETEIYTPENTLADVAMWDPQAPWCM* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01857 250 CDD AP2 41 101 IPR001471 GO:0003700|GO:0006355
Phac9g01857 250 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Phac9g01857 250 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Phac9g01857 250 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 15 156 - -
Phac9g01857 250 Gene3D AP2/ERF domain 42 100 IPR036955 GO:0003700|GO:0006355
Phac9g01857 250 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Phac9g01857 250 SUPERFAMILY DNA-binding domain 42 100 IPR016177 GO:0003677
Phac9g01857 250 FunFam Ethylene-responsive transcription factor 2 41 100 - -
Phac9g01857 250 Pfam AP2 domain 42 91 IPR001471 GO:0003700|GO:0006355
Phac9g01857 250 MobiDBLite consensus disorder prediction 1 41 - -
Phac9g01857 250 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01857 Phac-Chr9 15530597 15532635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01857 1 223 AP2-EREBP Transcription Factor Family AT1G75490 45.133 2.83e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac9g01857 AP2 3.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01857 - - gmx:100790057 368.237