Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01852 ATGGCCGGGTTCTTCTCTCTAGGTGGAACTAGAAGGGGAGGCCCACAGAACAAGGAAGAGGGAGAGGTGGGAAAAGGAGATAACAATAACAACAACAACGGGAATAACCTATTGTTGTTCAGGAACGAGGAGATCTACAACAAGGGGTTCGAAATATGGCCAGAATCGTATCAGCCTCAAGCTGCACCCCAGAACTTGAGCAACTACTTTGCATTTGGAGTGGGTCCTAGTCGCAGGAACTGCTCGAGCTTGAACGAGGAGGAGGTTTCACTGTGTGTGTCTGATGAGTCTACGAGATTTGGATTAACTGTCATGAGGTCCGGAGGTGTAGGAAGCAGCGGCATTAACTGTCAGGACTGTGGTAACCAAGCCAAGAAAGATTGTACACATCTCAGATGCAGGACCTGCTGTAAGACCCGAGGGTTTCCGTGTCAAACCCACGTTAAGAGCACTTGGGTTCCCGCAGCCAAACGCCGCGAACGACAACAACAACTCTCTGCGTTGCAGAACCCACAACAATTTCGCGGAGAGAATATTCCCAAACGACATCATAGAGACACTCAACTCGTCTCCGCTCCACAACCCATCGCAGGGTTAGAGCTGGGCCAGTTCCCACCTGAAGTGAGCACTTCGGCTGTGTTTCGGTGTGTGAGAGTCAGCGCAGTGGACGCTTCAGATGAACAGTGCGCGTATCAGACCTCTGTCAGCATCGGAGGGCATGTTTTCAAGGGAATTCTCTACGATCAAGGCCCTGAAAGTTCTTACACCAGTGCAGCTACTGAGGGTTCCTCCGGTGGTGATCCCCGACAGCTGGGCTTAATAACCGGCGTAGCCACAGCCACAACAACAAGTGGAAACCACCCATTTGACCCTTCACTCTACCCCGCTCCGCTGAATGCTTTCATGTCTGGTACACAATTCTTCCAGCCCCCAAGGTCCTAA 942 0.5159 MAGFFSLGGTRRGGPQNKEEGEVGKGDNNNNNNGNNLLLFRNEEIYNKGFEIWPESYQPQAAPQNLSNYFAFGVGPSRRNCSSLNEEEVSLCVSDESTRFGLTVMRSGGVGSSGINCQDCGNQAKKDCTHLRCRTCCKTRGFPCQTHVKSTWVPAAKRRERQQQLSALQNPQQFRGENIPKRHHRDTQLVSAPQPIAGLELGQFPPEVSTSAVFRCVRVSAVDASDEQCAYQTSVSIGGHVFKGILYDQGPESSYTSAATEGSSGGDPRQLGLITGVATATTTSGNHPFDPSLYPAPLNAFMSGTQFFQPPRS* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01852 313 MobiDBLite consensus disorder prediction 1 34 - -
Phac9g01852 313 NCBIfam putative zinc finger domain, LRP1 type 116 158 IPR006510 -
Phac9g01852 313 Pfam Domain of unknown function (DUF702) 114 252 - -
Phac9g01852 313 NCBIfam LRP1 C-terminal domain 203 251 IPR006511 -
Phac9g01852 313 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 299 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01852 Phac-Chr9 15443971 15446609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01852 1 313 C2H2 Transcription Factor Family AT1G75520 44.715 1.15e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Phac9g01852 DUF702 5.7e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01852 - - gmx:100818588 461.07