Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01826 ATGGATGATGCTGGGCATCGTGAAAATGGCAGGCACAAAGCCGATCAATTTAAATCTGCTCAGGGACAGTGGCTGATGCAACATCAGCCTTCCATGAAGCAGATCATGGCAATTATGGCCGAAAGAGATGCAGCCATCCAAGAAAGAAATCTGGCCATTTCTGAGAAGAAGGCAGCATATGCTGAACGTGACATGGCATTTCTGCAGCGAGATGCTGCAATTGCAGAACGAAATAATGCAATTTTGGAACGAGATAATGCGATTGCAACTCTTCAGTATCGAGAAACCTCGTTAAGTAGTGGCAGTATGCCATCATGCCCTCCGGGATGCCAAATTTCACGTGGTGTCAAGCATATACATCATCCCCAGCAACAGGTACACCATATACCTAACATGGGTGATCCTTCTTACAACACAAGGGAGATGCACACAACTGATGTCCTCCCTGCAGCTCCCATCACTTCTGAGGCTGGGAAATCAAGGCGAGCCAAGCGGCCCAAGGAACCTAAGTCAACTTCACCTAATAAGAAGACTACAAAAGCAGCAAAAAAAGTCAAAAAGGAGAGCGAAGACTTGAATAAGGTAATGTTTGGCAAGGCACATGAGTGGAAGAATGGTCAGGAAATGGTCAACGGGGGCGATGATCTTAACAAGCAGTTAGTGGTGTCTAAGGCTGATTGGAAAGGTCAGGACTTGGGATTGAACCAGGTGGCTTATGATGAGTCAACCATGCCAGCGCCAGTATGTTCTTGTACCGGGGTCCTTAAGCAGTGTTACAAATGGGGTAATGGAGGTTGGCAGTCCGCCTGTTGCACAACCACTCTGTCAATGTATCCACTTCCTGCAGTGCCGAACAAGAGGCATGCTCGGGTTGGAGGTCGAAAGATGAGTGGTAGCGCTTTCAACAAGCTGCTTAGTCGCCTTGCCGCAGAAGGTCACGATCTGTCAAACCCTGTTGACCTCAAAGACCATTGGGCCAAACACGGGACAAACCGGTACATTACAATAAAGTAG 1014 0.4783 MDDAGHRENGRHKADQFKSAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLAISEKKAAYAERDMAFLQRDAAIAERNNAILERDNAIATLQYRETSLSSGSMPSCPPGCQISRGVKHIHHPQQQVHHIPNMGDPSYNTREMHTTDVLPAAPITSEAGKSRRAKRPKEPKSTSPNKKTTKAAKKVKKESEDLNKVMFGKAHEWKNGQEMVNGGDDLNKQLVVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGVLKQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01826 337 Coils Coil 58 85 - -
Phac9g01826 337 MobiDBLite consensus disorder prediction 1 15 - -
Phac9g01826 337 MobiDBLite consensus disorder prediction 1 22 - -
Phac9g01826 337 PANTHER - 1 337 IPR010409 -
Phac9g01826 337 MobiDBLite consensus disorder prediction 158 174 - -
Phac9g01826 337 MobiDBLite consensus disorder prediction 146 189 - -
Phac9g01826 337 SMART GAGA_bind_2 1 337 IPR010409 -
Phac9g01826 337 Pfam GAGA binding protein-like family 1 337 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01826 Phac-Chr9 15098464 15102707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01826 65 337 BBR or BPC Transcription factor family AT5G42520 65.517 1.15e-121 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Phac9g01826 GAGA_bind 9.2e-111 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01826 - - gmx:100783502 620.928