Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01811 ATGAGCAAAACAGTTAATCTTCCCCCTCCGGTTCAAATCGAGCCTTCCGTAAGAGGAAAGCAAAATGGTAAATCAAAACTTTCAAGAAACACAAAATCTGGGACTCACAGACCTGGTGCCGATTCCCCTAATTCAACTGTGGTTAACAACTGTCGTTATGACAGTTCCTTAGGACTGTTAACAAAGAAATTTGTGAGCTTGATCCAAGATGCTAAGGATGGCACCCTGGATCTTAATAAAACCGCTGAGATCTTGGAGGTTCAGAAAAGGAGAATTTATGACATTACAAATGTTCTTGAAGGAGTAGGATTGATAGAGAAAACTTCAAAGAATCATATACAGTGGAAGGGATGTGATGGACTTGGGCCACGAGAACTGGAAGACCAAATTAACAGTCTAAAGGCTGAAGTTGAAAGTCTATATGCCAGGGAATGCGAACTTGATGATTGTATAAGGAAAAAACAGGAGCTTCTAAGAAACCTAGAGGAAAGTGAAAGCTCTCAAAAGTACCTTTTTTTGACCAAGGAAGAGATTCTTAGTCTTCCATGCTTCCAGAATCAGGAAATTATTGCAATCAAGGCTCCAAAAGCTAGTTTCATCGAGGTCCCTGATCCTGATGAGGAATTAGTTTTCCGGCAAAGACAGTACAAAATGATTGTTAGAAGCGCCACTGGACCAATATATTTGTACCTCTTGAGCAAGGATGACTGCAAGTATGAGGATGATAGTGTCAAACGGGTGAAAGTAACGGATCCATCGTGGAATAGTGAGCACTACAGAAAGAGGGGTGTGGGATTATTAGAAAGCCAAGATGATAAAAAAAATACTTCTGAGAGTTTCAATTTTCAGGGATCACAATCATCTGGAATTCAAGAAATAACTCCCACCGATTTTGAAATGGAAGATGACTACTGGTTTCAATCAGATCCTGGAGTGAGGTTAACAGAACTGTGGGAAAATGAGCCGTTGATGCAGATAGATGAGCTTGGAGACGATTAA 999 0.4034 MSKTVNLPPPVQIEPSVRGKQNGKSKLSRNTKSGTHRPGADSPNSTVVNNCRYDSSLGLLTKKFVSLIQDAKDGTLDLNKTAEILEVQKRRIYDITNVLEGVGLIEKTSKNHIQWKGCDGLGPRELEDQINSLKAEVESLYARECELDDCIRKKQELLRNLEESESSQKYLFLTKEEILSLPCFQNQEIIAIKAPKASFIEVPDPDEELVFRQRQYKMIVRSATGPIYLYLLSKDDCKYEDDSVKRVKVTDPSWNSEHYRKRGVGLLESQDDKKNTSESFNFQGSQSSGIQEITPTDFEMEDDYWFQSDPGVRLTELWENEPLMQIDELGDD* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01811 332 MobiDBLite consensus disorder prediction 1 47 - -
Phac9g01811 332 MobiDBLite consensus disorder prediction 18 47 - -
Phac9g01811 332 MobiDBLite consensus disorder prediction 268 288 - -
Phac9g01811 332 Gene3D - 124 235 - -
Phac9g01811 332 SUPERFAMILY "Winged helix" DNA-binding domain 52 115 IPR036390 -
Phac9g01811 332 Gene3D - 47 119 IPR036388 -
Phac9g01811 332 SUPERFAMILY E2F-DP heterodimerization region 128 235 IPR037241 -
Phac9g01811 332 SMART E2F_TDP_2 52 117 IPR003316 GO:0005667|GO:0006355
Phac9g01811 332 Pfam E2F transcription factor CC-MB domain 133 232 IPR032198 GO:0046983
Phac9g01811 332 CDD E2F_DD 128 235 IPR032198 GO:0046983
Phac9g01811 332 PANTHER TRANSCRIPTION FACTOR E2F 22 320 IPR015633 GO:0000978|GO:0006357
Phac9g01811 332 Pfam E2F/DP family winged-helix DNA-binding domain 54 117 IPR003316 GO:0005667|GO:0006355
Phac9g01811 332 Coils Coil 147 167 - -
Phac9g01811 332 FunFam E2F transcription factor 1 46 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01811 Phac-Chr9 14798452 14802809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01811 50 320 E2F-DP Transcription Factor Family AT1G47870 54.613 6.46e-92 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Phac9g01811 E2F_CC-MB 1.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01811 K06620 - gmx:100797301 535.413