Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01798 ATGAAGGGCATGGATGAGAGTAGTACCGATGATGGAAACAATCATAACTGGTTGGGGTTCTCTCTCTCACCCCACATGAAAATGGAGGTTACTTCAGCAGCCACTGTTCCGACAACCTTCTACATGTCCTCTCCTCACATTTCCAGCTCAGGAATCTGTTACGGTGTCGGGGCAAATGGTAACTTCCATTCTCCTCTTACCGTTATGCCTATTAAGTCAGATGGGTCACTTTGTATCTTGGAAGCTCTCAATAGATCACAATCAGAAGTGATGGTGCCAAGTTCTACGCCTAAATTGGAGGACTTCCTTGGTGGTGCAACTATGGGAAGTCACGAATATGGGAGCCACGAGAGAGGGGCAAATGCAATGGCTCTGAGTCTAGACAGCATCTATTATAGCACCCAAAATGCTCAGGCTCAACCCAACAGAGACACTCTCTCAGAACCCTTCAGGCAACAAGGGCATATGAACGTCCAAACGCACCCTTATTACTCAGGACTTGGTTGCCACGGGATGTATCAAGCACAGTTGGAGGAAGAAGCAACGAAGGAAGCCCACGCTTCAGTTTGCAGCTCCCTAATGCCTCAAATGACAGAAAATAGTTTGAAAAACTGGGTGGCTACAAGGGAATATTCAACTCAACAGCAGATTTTGGAGCAGCAAATGAACTGTGGAATGGGGAATGAGAGAAGTGGCATGTCTCTTGGAACTGTGGGGTGTGGCGAGTTACAGTCACTGAGTTTATCGATGAGTCCCGGTTCTCAGTCTAGTTGTGTCACTGCACCTTCTGTGACAGATTCTGTGGCTGTGGATGCAAAGAAGAGAGGGCATGTAAAGCTGGGTCAAAAGCAACCAGTGCACAGGAAATCTATTGACACATTTGGGCAGAGAACTTCTCAGTATAGAGGTGTCACAAGGCATAGATGGACTGGTAGGTATGAAGCACATTTGTGGGATAATAGTTGCAAGAAGGAAGGGCAGACTAGGAAAGGAAGGCAAGGGGGTTACGATATGGAAGAGAAAGCTGCAAGAGCGTATGATCTCGCGGCTCTTAAGTACTGGGGACCTTCAACGCATATAAACTTTTCGATTGAAAATTACCAAGTTGAACTTGAAGAAATGAAGAACATGAGCAGGCAAGAATATGTTGCACACTTAAGAAGAAAAAGCAGTGGATTTTCAAGAGGTGCTTCAATATACCGAGGGGTCACAAGGCACCACCAACATGGAAGATGGCAAGCAAGGATAGGTAGAGTTGCTGGGAACAAGGACCTATACCTCGGGACATTCAGCACTCAGGAGGAAGCAGCAGAAGCATACGATGTAGCCGCAATCAAATTTCGCGGCGCAAATGCAGTCACGAACTTTGACATATCAAGATACGATGTGGAGAGAATCATGGCCAGTATTAACCTTCTTGCTGGTGAGCTTGCAAGGAGAAATAAAGATAATGATCCAAGAAACGAGGGCAGTGAGTACAATATCGAAAAAAATAACAAGGGTGTGGTGACAAGTCAGAGCAACGAGGAAATGGTTCAAGGTAGAAACAACAATGAAAACGATTCAGAGTGGAAAATGGTTTTGTTGAATCACCCTTCACAGCAGCAACAGTCAACTGGCAGTGAGCAAAAACTGATGAACTGCGGAAATTATAGAAACAGTGCATTCTCTGGGGCCCTACAAGATCTCATTGGGATTGATTCGGTGGACATGTGTAGCAAAATTGGGACTCATTTTTCAAACGCGTCCTCGCTGGTAACCAGTTTGAGCAGCTCAAGAGAGGCTAGTCCTGAGAAAACAGGTCCCTCGCTTCTGTTTCCAAAGCCCCCAATGGAAACAAAGATTGTGAACCCCATTAGTACTAGTGTTACATCTTGGTTACCCTCACCAACGGTTCAAATGAGGCCACCTCCTGCTATTTCTTTGTCTCACTTGCCAGTTTTTGCTGCTTGGACTGATACTTAA 1965 0.4565 MKGMDESSTDDGNNHNWLGFSLSPHMKMEVTSAATVPTTFYMSSPHISSSGICYGVGANGNFHSPLTVMPIKSDGSLCILEALNRSQSEVMVPSSTPKLEDFLGGATMGSHEYGSHERGANAMALSLDSIYYSTQNAQAQPNRDTLSEPFRQQGHMNVQTHPYYSGLGCHGMYQAQLEEEATKEAHASVCSSLMPQMTENSLKNWVATREYSTQQQILEQQMNCGMGNERSGMSLGTVGCGELQSLSLSMSPGSQSSCVTAPSVTDSVAVDAKKRGHVKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFSIENYQVELEEMKNMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISRYDVERIMASINLLAGELARRNKDNDPRNEGSEYNIEKNNKGVVTSQSNEEMVQGRNNNENDSEWKMVLLNHPSQQQQSTGSEQKLMNCGNYRNSAFSGALQDLIGIDSVDMCSKIGTHFSNASSLVTSLSSSREASPEKTGPSLLFPKPPMETKIVNPISTSVTSWLPSPTVQMRPPPAISLSHLPVFAAWTDT* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01798 654 MobiDBLite consensus disorder prediction 481 515 - -
Phac9g01798 654 CDD AP2 299 362 IPR001471 GO:0003700|GO:0006355
Phac9g01798 654 Pfam AP2 domain 300 355 IPR001471 GO:0003700|GO:0006355
Phac9g01798 654 Pfam AP2 domain 399 449 IPR001471 GO:0003700|GO:0006355
Phac9g01798 654 ProSiteProfiles AP2/ERF domain profile. 300 363 IPR001471 GO:0003700|GO:0006355
Phac9g01798 654 SUPERFAMILY DNA-binding domain 299 365 IPR016177 GO:0003677
Phac9g01798 654 PRINTS Ethylene responsive element binding protein signature 301 312 IPR001471 GO:0003700|GO:0006355
Phac9g01798 654 PRINTS Ethylene responsive element binding protein signature 439 459 IPR001471 GO:0003700|GO:0006355
Phac9g01798 654 FunFam AP2-like ethylene-responsive transcription factor ANT 299 365 - -
Phac9g01798 654 SMART rav1_2 300 369 IPR001471 GO:0003700|GO:0006355
Phac9g01798 654 SMART rav1_2 399 463 IPR001471 GO:0003700|GO:0006355
Phac9g01798 654 Gene3D AP2/ERF domain 399 459 IPR036955 GO:0003700|GO:0006355
Phac9g01798 654 Gene3D AP2/ERF domain 299 365 IPR036955 GO:0003700|GO:0006355
Phac9g01798 654 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 93 535 - -
Phac9g01798 654 FunFam AP2-like ethylene-responsive transcription factor 398 459 - -
Phac9g01798 654 CDD AP2 398 459 IPR001471 GO:0003700|GO:0006355
Phac9g01798 654 MobiDBLite consensus disorder prediction 495 515 - -
Phac9g01798 654 SUPERFAMILY DNA-binding domain 398 459 IPR016177 GO:0003677
Phac9g01798 654 ProSiteProfiles AP2/ERF domain profile. 399 457 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01798 Phac-Chr9 14683109 14687829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01798 10 483 AP2-EREBP Transcription Factor Family AT4G37750 52.250 1.08e-152 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Phac9g01798 AP2 4.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01798 K09285 - gmx:100787223 1118.22