Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01786 ATGGTTAATCATGAACTGAGATTTATTGTTTCCATGATGTTCAGATTTCGTGATTGGAATTCAGACAAGGGTTCTGAGAGCAGCTCCCCTGCAATTCATGTAGAACGCCAGGGGGGGATCAAGAATAAACTAAATTCAGTTTCTGAGAAGTTTCAAAGGGGTTTGGAATCTAGTTCAGAGGGGATGAAGAGATTTAGAAAATCATTCAAATCTCTTCCCTATAACAGAGTTCTCTCTAGAAGTTTTAGTTCTAGAAAGAAAATTCTTGATCCCCAGGGTCCTTTCCTTCAAAAGTGGAATAAGATATTTGTATTATCATGTCTTATTGCTGTGTCGCTTGATCCCTTGTTCTTCTATGTTCCTGTGATTGATGATGACAATAAATGTCTTTCTCTGGACAGAAAAATGGAAATTACAGCAACTGTTTTAAGATCTTTCTCTGATATTTTTTATATAATCCATATAATTTTCCAATTTCGTACTGGATTCATTGCTCCCTCTTCTCGAGTATTTGGGAGAGGTGTTTTGGTTGAAGATGCTTGGGTAATAGCAATGCGGTATCTTTCGTCATACTTCTTAATTGACATTCTTGCCGTTCTTCCCCTCCCACAGGTGGCAATTCTAATTATCATTCCAAAGTTGAGGGGCTCTGAATCACTGAATACAAAGACCTTGCTGAAATTTATTGTCTTCTTCCAATATATACCACGATTTTTGCGATTAATTCCATTATATAAAGAAGTTACTAGGACCTCTGGCATCCTCACTGAAACAGCTTGGGCTGGAGCTGCATTCAATCTCTTTCTTTACATGCTAGCAAGTCATGTTATTGGTGCCTTTTGGTACTTGTTTTCTATAGAAAGAGAAACCACATGCTGGCAAGATGCGTGTCGAAGAAATAGCACATGTAACACAGAAGCTATGTATTGTGATAATCATAAAGTTTTGGGCACAATTTCAGTATTCCTGAATGCTTCTTGCCCAATACAGGATCAAAATACAACACTCTTTAATTTTGGAATATTTCTTGATGCCCTTCAATCTGGAGTTGTGGAATCAAGAGATTTCCCACAGAAGTTCTTTTATTGTTTTTGGTGGGGCCTACGAAATTTGAGTTCTCTTGGTCAGAACCTTGCAACAAGTACCTATGTTTGGGAAATCTGCTTTGCAATTTTCATTTCAATTGCTGGTTTGGTATTATTTGCATTCCTCATTGGAAATATGCAGACATATTTGCAGTCAACGACTACCAGATTGGAGGAAATGAGGGTGAAAAGGAGAGATGCTGAGCAGTGGATGTCTCATCGATTACTCCCTGACAGCCTGAGAGAAAGAATCAGACGACATGAGCAGTACAAATGGCAAGAAACCAGAGGTGTTGATGAAGACAATTTGATCCGAGATCTTCCAAAGGATTTGAGAAGGGATATTAAGCGGCATCTTTGCTTAGCTTTGCTGATGAGGGTGCCAATGTTTGAGAAAATGGATGAGCAACTTCTGGATGCAATGTGTGACAGACTCAAGCCAGTGCTGTACACAGAAGAAAGCTGCATTGTCCGGGAAGGAGATCCTGTTGATGAGATGCTCTTCATAATGCGCGGCAAGCTATTGACTGTGACCACTAATGGTGGAAGAACTGGCTTCTTTAACTCTGAATACCTCAAGGCTGGCGACTTTTGTGGAGAGGAACTTCTCACGTGGGCATTAGATCCTCACTCCTCATCCAACCTTCCCATATCAACTAGGACTGTCCAAACTCTTTCAGAAGTGGAAGCATTTGCTCTGAAAGCCGATGACTTGAAGTTTGTTGCATCACAGTTCCGGCGCCTTCATAGCAAGCAGCTTCGTCACACTTTCAGGTTTTATTCACAACAATGGCGTTCATGGGCTGCATGTTTCATACAAGCAGCGTGGAGGCGTTACAGTAAGAAGAAGCTGGAAGAGTCTCTCAGGGAAGAAGAGAATAGGTTGCAAGATGCATTGGCCAAAGCAGGTGGTAGCTCGCCTAGTCTAGGTGCCACAATATATGCTTCAAGGTTTGCAGCTAATGCACTCAGACTTTTACGTAGAAATAGCACAAGAAAGGCCAGAGTGCCAGAAAGAATATCACCCATGCTGCTGCAGAAGCCTGCTGAGCCTGATTTTACTTCTGAAGAACAATAG 2163 0.411 MVNHELRFIVSMMFRFRDWNSDKGSESSSPAIHVERQGGIKNKLNSVSEKFQRGLESSSEGMKRFRKSFKSLPYNRVLSRSFSSRKKILDPQGPFLQKWNKIFVLSCLIAVSLDPLFFYVPVIDDDNKCLSLDRKMEITATVLRSFSDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDAWVIAMRYLSSYFLIDILAVLPLPQVAILIIIPKLRGSESLNTKTLLKFIVFFQYIPRFLRLIPLYKEVTRTSGILTETAWAGAAFNLFLYMLASHVIGAFWYLFSIERETTCWQDACRRNSTCNTEAMYCDNHKVLGTISVFLNASCPIQDQNTTLFNFGIFLDALQSGVVESRDFPQKFFYCFWWGLRNLSSLGQNLATSTYVWEICFAIFISIAGLVLFAFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDSLRERIRRHEQYKWQETRGVDEDNLIRDLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDAMCDRLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPHSSSNLPISTRTVQTLSEVEAFALKADDLKFVASQFRRLHSKQLRHTFRFYSQQWRSWAACFIQAAWRRYSKKKLEESLREEENRLQDALAKAGGSSPSLGATIYASRFAANALRLLRRNSTRKARVPERISPMLLQKPAEPDFTSEEQ* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01786 720 Pfam Cyclic nucleotide-binding domain 512 602 IPR000595 -
Phac9g01786 720 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 66 715 - -
Phac9g01786 720 SUPERFAMILY cAMP-binding domain-like 420 613 IPR018490 -
Phac9g01786 720 CDD CAP_ED 491 622 IPR000595 -
Phac9g01786 720 SMART cnmp_10 491 622 IPR000595 -
Phac9g01786 720 Gene3D Helix hairpin bin 417 482 - -
Phac9g01786 720 FunFam Cyclic nucleotide-gated ion channel 1 489 607 - -
Phac9g01786 720 ProSiteProfiles cAMP/cGMP binding motif profile. 491 575 IPR000595 -
Phac9g01786 720 Pfam Ion transport protein 99 418 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phac9g01786 720 Gene3D Jelly Rolls 489 609 IPR014710 -
Phac9g01786 720 Coils Coil 643 663 - -
Phac9g01786 720 Gene3D - 102 415 - -
Phac9g01786 720 FunFam Cyclic nucleotide-gated ion channel 1 418 482 - -
Phac9g01786 720 SUPERFAMILY Voltage-gated potassium channels 90 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01786 Phac-Chr9 14467872 14474885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01786 15 719 Ion Channels AT5G53130 79.690 0.0 1146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01786 K05391 - gmx:100817516 1345.1