Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01694 ATGACGGAACCTCAGAATCCTTCACCATTCACACATTCTTCAGCTTCGGAAATCGCACCACAACCACAACCTCCGCCACCTCCGAAAAAGAAACGGAGCCTCCCTGGAATGCCAGATCCAGATGCTGAAGTGATTGCTTTGTCACCGAAGACGCTGATGGCGACGAACCGTTTCGTTTGCGAGATCTGTAACAAAGGGTTCCAGCGCGATCAGAATCTGCAGCTTCACCGGCGCGGTCACAACTTGCCGTGGAAGCTGCGGCAGCGAGGGAGCAAGGAACCGCGGAAGAAAGCGTACGTGTGTCCCGAGCCTTCCTGCGTCCACCACAACCCCGCCAGGGCGCTCGGCGACCTGACTGGCATCAAGAAGCACTTCTGCAGAAAACACGGTGAGAAAAAGTGGAAATGCGAACGCTGCTCTAAGAAATACGCTGTTCAGTCGGACTGGAAAGCTCATATGAAAACTTGTGGCAGCAGAGAGTACCGATGCGACTGCGGAGCCTTGTTCTCGAGGAGGGATAGTTTCATCACGCACAGAGCATTTTGTGATGTATTAGCGCAAGAGAGTGCCAAGTCTCAGGCCCAAAATGTTAGCACTAGCAACGCTGATGTGCCTTCTTCCCCCCCTGCACCTCCACTCACTCCCTCTGCGACCGTCGTGTCTCCAACTTTCTCCATTCAGAGTTCCGAAAACCCAAGGAAGCTGTCACCGATGTCTCCAAACGCAACGTGCTTCGTGACAAGCAGCACCCCTTCCGGTTCCACTGTTTGTACCACTGTTTTTGCAAGTGTGTTGGCACCGTCCACAACGACAACTCATTCACAATCCCAATCACCGTCACCATCAACTTCCTCGTTCTTCAACCTCATGTCAAACTTGGCTCGCTCGGATAACCCTAATGCCATATCTAACCTGAGAGAACCCACATCCCTCTCCCTCTCCTCACCACTCTATCTCTCCAACAATGACCCTTCCCACTTCACAGCATCTCCTCAACCTGCTCTATCTGCCACTGCATTACTCCAAAAAGCAGCTCAAATGGGTGCATCCAGTGCTTCCCTTCTTCGTGGCTTAGGCTTAGCAAAGACACCATCATCATCATTATCATCCTTGCAGAAAGACGAGCGTTTTAACATTAACGCAACCACAACCGCACAATGGAACGAGCGAGTAAAACAAGAGAATCAGCCCGTGCTGGATAACCTTGGGCTTGGGCTTCCCTGTGGGAGTGGAAGTGTGACAGATGTGATGATGGGCCCTTCTACCCCAATTGTGGGCCAGCCGATGACCCGTGATCTTCTCGGTCTTAGCATCGGTGGCGGAGCTAGCAGGGGTGGTCTCTCTGCCCTGGTCACGTCTTTCGGAGGGAACTTCGATTCACCCGGTGATGAAGGAGTTCACCGCTAG 1407 0.5274 MTEPQNPSPFTHSSASEIAPQPQPPPPPKKKRSLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRGSKEPRKKAYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGSREYRCDCGALFSRRDSFITHRAFCDVLAQESAKSQAQNVSTSNADVPSSPPAPPLTPSATVVSPTFSIQSSENPRKLSPMSPNATCFVTSSTPSGSTVCTTVFASVLAPSTTTTHSQSQSPSPSTSSFFNLMSNLARSDNPNAISNLREPTSLSLSSPLYLSNNDPSHFTASPQPALSATALLQKAAQMGASSASLLRGLGLAKTPSSSLSSLQKDERFNINATTTAQWNERVKQENQPVLDNLGLGLPCGSGSVTDVMMGPSTPIVGQPMTRDLLGLSIGGGASRGGLSALVTSFGGNFDSPGDEGVHR* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01694 468 MobiDBLite consensus disorder prediction 217 240 - -
Phac9g01694 468 MobiDBLite consensus disorder prediction 1 42 - -
Phac9g01694 468 Gene3D Classic Zinc Finger 38 105 - -
Phac9g01694 468 SUPERFAMILY beta-beta-alpha zinc fingers 57 155 IPR036236 -
Phac9g01694 468 Gene3D Classic Zinc Finger 112 193 - -
Phac9g01694 468 ProSiteProfiles Zinc finger C2H2 type domain profile. 58 80 IPR013087 -
Phac9g01694 468 Pfam Zinc-finger of C2H2 type 58 80 - -
Phac9g01694 468 FunFam protein indeterminate-domain 12-like 37 105 - -
Phac9g01694 468 MobiDBLite consensus disorder prediction 19 33 - -
Phac9g01694 468 SMART c2h2final6 134 154 IPR013087 -
Phac9g01694 468 SMART c2h2final6 99 129 IPR013087 -
Phac9g01694 468 SMART c2h2final6 58 80 IPR013087 -
Phac9g01694 468 MobiDBLite consensus disorder prediction 1 18 - -
Phac9g01694 468 ProSitePatterns Zinc finger C2H2 type domain signature. 60 80 IPR013087 -
Phac9g01694 468 FunFam protein indeterminate-domain 5, chloroplastic-like 112 191 - -
Phac9g01694 468 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 11 437 IPR031140 -
Phac9g01694 468 MobiDBLite consensus disorder prediction 193 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01694 Phac-Chr9 13887034 13890254 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01694 29 436 IDZ Gene Family AT5G66730 51.236 5.96e-129 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac9g01694 zf-met 0.0033 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01694 K25869 - gmx:100800089 710.294