Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01647 ATGGCCTCGGGCTGCTTTCTATTGCTCTCCCTATTCCTCTTCTCATCATTGTCATCTTCCTCCTATGCACTTTCCGATGTTGAAGCCTCTTTCATTGCTCGTCGACAATTGATGCACTTGAATGAGAATGAGGACTTGCCCAGCAACTACGTAAGTAACTACAAAACGAACTTTAAGTTCTCTAACCCTAGACTAAAAAGTGCATACATTGCACTTGAGGCCTGGAAAAAAGCTATCTACTCAGACCCCTCCAATTTCACATCAAATTGGTCGGGCGCAGATGTTTGCTCCTACAATGGAGTTTTCTGTGAAAAGGCTCTAGATGACCCAAAGATCGAAGTTGTAGCTGGGATTGACCTTAACAATGCAGACATCGCAGGTTACATTCCCCCAGAAGTTGGTCTGTTAGTTGACCTTGCACTTTTGCATATAAACTCCAACAGGTTTTGTGGGATTATCCCACACAGCTTTTCCAATCTTAAGATTCTCTATGAGCTAGACATCAGCAACAACCGCTTTGTAGGGCAGTTCCCTGAAAGCGTGCTTTCAATTCCAGACCTCAAATTCCTTGACATCAGGTTCAATGACTTTGAAGGGGAACTGCCTTCTGAGCTTTTCGAAAAAAGTTTCGATGCTATATTTTTGAACAACAACCGCTTCACGTCCACCATTCCTCAGAACCTAGGATCAACTCCAGCCACGGTTGTGGTTATGGCCAATAACAATCTCTCAGGGTGCGTGCCTGCCAGCATTGGCGACATGAAGTCATTGAACGAGTTTATTTTGATCAACAACAACCTCATGGGTTGCTTGCCACCAGAAATTGGAAATCTCGATAAAGTTTCAGTGTTTGACATAAGCAACAACAACTTCGTTGGCGTCTTGCCCAAGACCTTAAATGGGCTGAAGAATGTTGAGCACTTGTCCATTTCACATAACAAGTTTACAGGTTTTGTCCCGCGTAATGTTTGCAGCTTGCCCCATTTGATGAACTTCACATTCTCCGATAACTATTTCAACGGAGAGGAAGAGGGTTGCTCACCTCAAAAGAAACAGCCGGCATTGGACGATGAGAACAATTGCATACCAGATAGGCCAAAGCAAAAACAGTCAAACGCTTGCAATGAGGTGATAAGCAAGCCTGTGGATTGTAGCAAAGACAAGTGTGGCCATGGAAGCCCTCCATCTTCCAGTTCTCCAAAAACTCCCCCAACACCTACCCCAACTCCAAAGCAAGAAACCCCTACCCCTCAACAACCCAAACCCTCACCACCACCAGAGGACAATTCCCACGAGGAAGCACCCAAGCACCACGAAAGATCTCCACCACCGCCTGTCCACTCTCCTCCTCCTCCTGTCCACTCCCCACCACCACCTGTTCACTCCCCACCACCTCCTGTCCATTCTCCACCACCACCCGTTCACTCTCCACCTCCACCGGTTCACTCACCTCCACCACCCGTTCACTCACCACCACCACCACCCGTTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCCACCACCTCCTGTCCATTCCCCACCTCCCCCAGTTCACTCTCCACCACCACCAGTTCACTCTCCTCCTCCCCCGGTTCACTCTCCTCCACCACCTGTTCACTCTCCACCACCTCCAGTGCACTCTCCACCGCCACCGGTGCAACCTCCTCCACCTGCTTCGCCTCCTATGGAAGACGTCTTCCTTCCCCCTCACTTCGGCTCTTCTTATGCTTCACCCCCTCCACCCATCATTGCCGGCTACTAG 2058 0.4145 MASGCFLLLSLFLFSSLSSSSYALSDVEASFIARRQLMHLNENEDLPSNYVSNYKTNFKFSNPRLKSAYIALEAWKKAIYSDPSNFTSNWSGADVCSYNGVFCEKALDDPKIEVVAGIDLNNADIAGYIPPEVGLLVDLALLHINSNRFCGIIPHSFSNLKILYELDISNNRFVGQFPESVLSIPDLKFLDIRFNDFEGELPSELFEKSFDAIFLNNNRFTSTIPQNLGSTPATVVVMANNNLSGCVPASIGDMKSLNEFILINNNLMGCLPPEIGNLDKVSVFDISNNNFVGVLPKTLNGLKNVEHLSISHNKFTGFVPRNVCSLPHLMNFTFSDNYFNGEEEGCSPQKKQPALDDENNCIPDRPKQKQSNACNEVISKPVDCSKDKCGHGSPPSSSSPKTPPTPTPTPKQETPTPQQPKPSPPPEDNSHEEAPKHHERSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVQPPPPASPPMEDVFLPPHFGSSYASPPPPIIAGY* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01647 685 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 7 495 - -
Phac9g01647 685 SUPERFAMILY L domain-like 71 362 - -
Phac9g01647 685 Pfam Leucine rich repeat N-terminal domain 70 103 IPR013210 -
Phac9g01647 685 MobiDBLite consensus disorder prediction 444 498 - -
Phac9g01647 685 PRINTS Proline rich extensin signature 404 420 - -
Phac9g01647 685 PRINTS Proline rich extensin signature 432 449 - -
Phac9g01647 685 PRINTS Proline rich extensin signature 383 404 - -
Phac9g01647 685 PRINTS Proline rich extensin signature 452 477 - -
Phac9g01647 685 FunFam Leucine-rich repeat extensin-like protein 1 69 230 - -
Phac9g01647 685 Gene3D Ribonuclease Inhibitor 68 231 IPR032675 -
Phac9g01647 685 Gene3D Ribonuclease Inhibitor 232 362 IPR032675 -
Phac9g01647 685 Coils Coil 496 496 - -
Phac9g01647 685 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 248 342 - -
Phac9g01647 685 MobiDBLite consensus disorder prediction 426 443 - -
Phac9g01647 685 Pfam Leucine rich repeat 139 197 IPR001611 GO:0005515
Phac9g01647 685 Pfam Leucine rich repeat 282 337 IPR001611 GO:0005515
Phac9g01647 685 MobiDBLite consensus disorder prediction 605 663 - -
Phac9g01647 685 MobiDBLite consensus disorder prediction 340 500 - -
Phac9g01647 685 MobiDBLite consensus disorder prediction 585 685 - -
Phac9g01647 685 MobiDBLite consensus disorder prediction 397 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01647 Phac-Chr9 13538141 13540225 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01647 4 390 Trihelix Transcription Factor Family AT3G19020 61.795 1.59e-172 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01647 - - gmx:100780677 622.083