Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01641 ATGGAAGCTTTCAACAGAACCTCCTCCACCGCCTCTTCTTCCTCTGACTCTTCCTCTTCCGACTCCAACCACAACAACCCCCACAGAATCAAAGGCCCATGGAGCGCCGAGGAGGATCGGATCCTCACCCGCCTCGTCGACCGATACGGACCCCGGAACTGGTCCCTCATCAGCCGCTACATTAAGGGGAGGTCTGGCAAGTCCTGCCGCCTGCGCTGGTGCAACCAGCTCAGCCCCACCGTCCAGCACCGCCCCTTCTCTCCCCAAGAGGACGAGACCATCATCGCCGCCCACGCCCAGTATGGTAACAGGTGGGCCACCATTGCCCGTTTGCTACCGGGCCGAACCGATAACGCCGTTAAGAACCACTGGAACTCCACGCTCAAGCGCAGGGCCAAGGCTCTTCTTGACATTAATGTTAATAATGCCAGCAGCGAAGGAGCCACTTCTTCTGCTCCTTCTCGCTCCTTCGAGGATGACCCGTTGACCGCGTTGACTCTCGCTCCCCCCGGTATCTCTAACGCTGCCGTGGCCGAGGACGCCGCACTGGACCACCGGGCTTCGCCGGAGAATGCGCCGGCGGGGTTTTGGGATATGATGAGAGATGTGATCGCGAGAGAAGTGAGGGAATATGTGTCTTCCAGTTTTTCTGATAACTCGAACTTTCATTAA 672 0.5818 MEAFNRTSSTASSSSDSSSSDSNHNNPHRIKGPWSAEEDRILTRLVDRYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPTVQHRPFSPQEDETIIAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRAKALLDINVNNASSEGATSSAPSRSFEDDPLTALTLAPPGISNAAVAEDAALDHRASPENAPAGFWDMMRDVIAREVREYVSSSFSDNSNFH* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01641 223 Pfam Myb-like DNA-binding domain 34 92 - -
Phac9g01641 223 MobiDBLite consensus disorder prediction 1 29 - -
Phac9g01641 223 PANTHER MYB PROTEIN-RELATED 31 152 - -
Phac9g01641 223 MobiDBLite consensus disorder prediction 1 34 - -
Phac9g01641 223 Gene3D - 84 152 - -
Phac9g01641 223 ProSiteProfiles Myb-like domain profile. 26 77 IPR001005 -
Phac9g01641 223 SMART sant 30 79 IPR001005 -
Phac9g01641 223 SMART sant 82 130 IPR001005 -
Phac9g01641 223 Gene3D - 30 82 - -
Phac9g01641 223 FunFam MYB transcription factor 31 82 - -
Phac9g01641 223 SUPERFAMILY Homeodomain-like 28 124 IPR009057 -
Phac9g01641 223 CDD SANT 33 75 IPR001005 -
Phac9g01641 223 ProSiteProfiles Myb-like domain profile. 78 128 IPR001005 -
Phac9g01641 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 132 IPR017930 -
Phac9g01641 223 CDD SANT 85 128 IPR001005 -
Phac9g01641 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 81 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01641 Phac-Chr9 13466213 13467691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01641 29 146 MYB Transcription Factor Family AT3G50060 69.492 9.96e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac9g01641 Myb_DNA-bind_6 1.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01641 - - vra:106761536 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01641 9 13466213 13467691 Phac9g01641 9 13466213 13467691 ECH