Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01612 ATGGTGGCAGCATCAGCTTACGAGGAGAGTCGTCGCAAGAGATTGGAGGAAAACAGAAAGAGAATGGAAGCTCTCAATCTCCCTCTCCTCTCTCGAGCCCTTCACAAACCCCATTCTCCCGTTTCCTCCCCTTTGAAATCGGTGAAGAAGCGCAACATTCAGGAACAAATGGTTGTCGTGAGAAGATCAGGCCGTCTGGCCAACTTGCCATCTCCTATTTACAAAGAAATAGTTATTGATCGTGTCTCTATAGCTCGAAGAAATATTGGCAATAGGCACAGAGATTTTGTTAATAGAGTATACGCTTCAGATGAAGCCAGGAAAGAAGCTTTAGAAAAAGCAGAAAACTTAATGTCGGGTTTAGAATCTGATTACCCGAACTTCATAAAGTCTATGCTCCAGTCCCATATCAGTGGAGGCTTCTGGCTGGGCCTTCCAGTCCATTTCTGCAAGAGCAATCTGCCAAAAGGGGATGAAGTGATGACTTTGATTGATGAAGATGGGAATGAGTATCCAACAATATATTTGCCACGTAAATCAGGACTTAGTGGGGGATGGAAAGGTTTTGCGGTTGCTCATGACCTAGCTGATGGGGACGCTTTAATTTTCCAATTAATCAGGCGCACTGCATTCAAGGTGTACATTATTAGAGCGAATAGTGCTTCAGAGGATATAAACAACTCAAGTGAATTGCAGTTGGAGATTGGAGCCAGTAAAATTAATCTAGGATCACTAATGTAG 741 0.4332 MVAASAYEESRRKRLEENRKRMEALNLPLLSRALHKPHSPVSSPLKSVKKRNIQEQMVVVRRSGRLANLPSPIYKEIVIDRVSIARRNIGNRHRDFVNRVYASDEARKEALEKAENLMSGLESDYPNFIKSMLQSHISGGFWLGLPVHFCKSNLPKGDEVMTLIDEDGNEYPTIYLPRKSGLSGGWKGFAVAHDLADGDALIFQLIRRTAFKVYIIRANSASEDINNSSELQLEIGASKINLGSLM* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01612 246 SMART B3_2 128 219 IPR003340 GO:0003677
Phac9g01612 246 Pfam B3 DNA binding domain 128 218 IPR003340 GO:0003677
Phac9g01612 246 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 55 219 IPR044837 -
Phac9g01612 246 Gene3D - 102 221 IPR015300 -
Phac9g01612 246 SUPERFAMILY DNA-binding pseudobarrel domain 122 219 IPR015300 -
Phac9g01612 246 ProSiteProfiles B3 DNA-binding domain profile. 128 219 IPR003340 GO:0003677
Phac9g01612 246 CDD B3_DNA 126 217 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01612 Phac-Chr9 13274416 13288455 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01612 48 229 B3 DNA Binding Superfamily AT5G42700 58.289 7.89e-69 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac9g01612 B3 1.3e-14 CL0405