Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01610 ATGTCTGGTCGGAGTGAACACCAAACGGTTCCCCTTTCGGTGCTGCTGAAGCGTGAGTTGGCCAACGAGAAAATTGAGAAGCCGGATGTTGTCATCGTGCACGGTCAAGCTAGTGAGAATAAGAAAGGAGAGGATTTCATGCTGTTGAAGACGGAATGCCAGAGGGTGGTGGGAGATGGGGTTTCTACGTATTCTGTTTTTGGGCTATTTGATGGACATAATGGATCTGCTGCCGCTATTTATACCAAGGAGAATCTCCTGAACAACGTTTTAAGTGCAATTCCTTCTGATCTTAACAGAGATGAGTGGGTTTCAGCGTTGCCTAGGGCTTTGGTTGCAGGCTTTGTAAAAACTGATAAAGATTTTCAAGAAAAAGCACACACATCAGGAACAACTGTAACCTTCATGATTATAGATGGGTGTGTTGTGACAGTTGCATCAGTTGGTGATTCCCGTTGCATACTTGAACCTTATGAAGGTGGGATTTATTACTTGTCAGCAGACCATAGACTAGATAGCAACGAAGAGGAGAGGGTCCGCATCACTTCTAGTGGAGGTGAGGTTGGTCGTTTAAATACAGGTGGAGGCACAGAGGTTGGTCCTTTGAGATGTTGGCCTGGTGGTTTGTGTCTCTCCCGATCCATTGGTGATATGGATGTTGGTGAATTTATTGTCCCTGTACCACACGTAAAGCAAGTGAAGCTTTCTACTGCTGGAGGCAGGATCATTATCAGCAGTGATGGTGTCTGGGATGCTCTAACAGCAGAATTGGCCCTTGATTGCTGTCGTGGCATGTCAGCTGAGGCTGCAGCACCACATATTGTGAAAGAAGCCGTGCAGGCAAAGGGACTTAGAGATGACACAACTTGCATTGTTATTGATGTATATCCGCAGGAGAAGCAACCTACTTCTGTTACAACACAAAAGAAACCGGTAAAAGGAAGGCTTAAGTCCATTTTTCGCAAAAAGTCCTCTGAATCATCATCTTACGTTGACAAACAATACCAGGAGCCAGATATGGTACAGGAACTATACGAGGAAGGGTCTGCTATGCTTTCAGAGAGGTTGGAAACAAAATATCCGCTCTGCAACATGTTCAAGTTGTTTATCTGCGCAGTGTGTCAGGTAGAGATTAAACCTGGGGAGGGTATTTCTATACACGTAGGTCTGTCTAACCCAGGAAGACTGCGTCCCTGGGATGGACCTTTCCTTTGCTCAAGCTGCCAGGAGAAGAGGGAAGCCATGGAAGGGAAGCGAGCATCAGACTCAGCAGCAGAAGTGACTAATGAATTATCATGTAATTTTGCATTTGAGAAACAAAGATTGTTCCTATAA 1335 0.4524 MSGRSEHQTVPLSVLLKRELANEKIEKPDVVIVHGQASENKKGEDFMLLKTECQRVVGDGVSTYSVFGLFDGHNGSAAAIYTKENLLNNVLSAIPSDLNRDEWVSALPRALVAGFVKTDKDFQEKAHTSGTTVTFMIIDGCVVTVASVGDSRCILEPYEGGIYYLSADHRLDSNEEERVRITSSGGEVGRLNTGGGTEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPHVKQVKLSTAGGRIIISSDGVWDALTAELALDCCRGMSAEAAAPHIVKEAVQAKGLRDDTTCIVIDVYPQEKQPTSVTTQKKPVKGRLKSIFRKKSSESSSYVDKQYQEPDMVQELYEEGSAMLSERLETKYPLCNMFKLFICAVCQVEIKPGEGISIHVGLSNPGRLRPWDGPFLCSSCQEKREAMEGKRASDSAAEVTNELSCNFAFEKQRLFL* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01610 444 SUPERFAMILY PP2C-like 40 295 IPR036457 -
Phac9g01610 444 SMART PP2C_4 23 293 IPR001932 -
Phac9g01610 444 CDD PP2Cc 40 295 IPR001932 -
Phac9g01610 444 SMART PP2C_SIG_2 48 295 IPR001932 -
Phac9g01610 444 FunFam probable protein phosphatase 2C 12 34 301 - -
Phac9g01610 444 PANTHER PROTEIN PHOSPHATASE 34 294 IPR015655 GO:0004722|GO:0006470
Phac9g01610 444 Pfam Protein phosphatase 2C 41 279 IPR001932 -
Phac9g01610 444 Gene3D - 25 305 IPR036457 -
Phac9g01610 444 ProSiteProfiles PPM-type phosphatase domain profile. 29 295 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01610 Phac-Chr9 13266683 13272130 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01610 1 421 PP2C-type Phosphatase Gene Family AT1G47380 77.197 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01610 - - vun:114164254 814.298