Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01600 ATGCTTTTCAGTCTGGCTGGAGATTTTGGATTTGACCCACTTGGGCTTGGAGAGGATCCTGAAACCTTAAGGTGGTATGTGCAGGCAGAGCTGGTTCATTCCCGCTTTGCAATGCTTGGGGTATTCGGAATTCTAGTGACAGATCTGCTTCGCGTCACAGGAGTTAGTACGATACCGGTTTGGTATGAAGCTGGTGCAGTAAAATACGAGCTTGCCAATACAGAGACACTCTTCATTGTTCAACTACTTTTGATGGGGTTTGCCGAAACAAAAAGGTACATGGATTTTGTTACTCCTGGATCTCAAGCTAAAGAGGGGTCCTTCTTTGGACTGGAAGCTGCACTGGAAGGCTTAGAGCCAGGGTACCCAGGGGGTCCTCTGCTAAATCCTCTTGGCCTAGCTAAAGACATTAAAAACGCTCATGATTCGAAGCTTAAAGAGATTAAAAATGGTCGACTTGCAATGGTGGCAATGCTTGGCATCTTTGTACAAGCTTCGGTGACTCACGTTGGACCAATTGACAACCTTGTGGAGCATCTTTCCAATCCATGGCATAAAACTATTATTCAGACCATTGCGAATTCTAGTTCTTAG 594 0.4529 MLFSLAGDFGFDPLGLGEDPETLRWYVQAELVHSRFAMLGVFGILVTDLLRVTGVSTIPVWYEAGAVKYELANTETLFIVQLLLMGFAETKRYMDFVTPGSQAKEGSFFGLEAALEGLEPGYPGGPLLNPLGLAKDIKNAHDSKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTIANSSS* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01600 197 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 5 195 IPR001344 GO:0009765|GO:0016020
Phac9g01600 197 Gene3D Chlorophyll a/b binding protein domain 2 197 - -
Phac9g01600 197 FunFam Chlorophyll a-b binding protein, chloroplastic 2 196 - -
Phac9g01600 197 Pfam Chlorophyll A-B binding protein 4 165 IPR022796 -
Phac9g01600 197 SUPERFAMILY Chlorophyll a-b binding protein 4 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01600 Phac-Chr9 13189941 13191818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01600 4 189 Chloroplast and Mitochondria Gene Families AT3G61470 47.059 2.15e-53 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01600 K08911 - gmx:100804934 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01600 9 13189941 13191818 Phac9g01600 9 13189941 13191818 ECH