Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01579 ATGGACACTGTGGAGCAGTTAAAGCCGGAGGAGAAGCAGCACCAGCAGATGGACATCATGACCATGATGATGCAACACATACCTCAATTCTCTGAACCCTACGGTGACACCAACACCATGGAAGATTTTCACCCCCCCGAGGACTTCTACGGTAACAACAACAATATATGCAGTGGTAGCACTGTGCCTCTAGCAGATTTAGTTGATAATAACCCTCCTAGCCCTATACCTTGGTCCTCTTACTCGTTCACGCACTTATTACCATCGTCCACATCTCCCACCACAATCTCTTTCTCCGACAACAACAACAACAACCCTTCCCCAATAATGCTTCAACAAACCCCGACCGAGGGTGCAACTGTAAACCCTTACAGTGAGAAGCGGAACTCCATGGCGGCGATGAGGGATATGATATTCAGGATGGCGGCGATGCAGCCGATACACATAGACCCGGAGTCGGTGAAGCCGCCGAAGCGGAGGAACGTGAAGATTTCGAAGGACCCTCAGAGTGTGGCAGCGCGGCACCGCAGAGAGAGGATCAGCGAGAGGATAAGGATACTGCAGAGACTGGTCCCTGGAGGGACCAAGATGGACACTGCGTCCATGTTGGATGAGGCCATTCACTACGTGAAGTTTCTGAAAACGCAGGTTCAGTCGCTGGAACGCGCTTCCTCTAACAATATTAGGCCACTTGTCGGTGTTAACGCACCAGGGATAGGGTTCCCTGTTGCTATGTCTGGTTCTATTAGGACTGCTACCACTTCCACTTCCACTTCCAATTCCACCCCTTATTTTCCTCTGCCTAATTGA 810 0.5074 MDTVEQLKPEEKQHQQMDIMTMMMQHIPQFSEPYGDTNTMEDFHPPEDFYGNNNNICSGSTVPLADLVDNNPPSPIPWSSYSFTHLLPSSTSPTTISFSDNNNNNPSPIMLQQTPTEGATVNPYSEKRNSMAAMRDMIFRMAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERASSNNIRPLVGVNAPGIGFPVAMSGSIRTATTSTSTSNSTPYFPLPN* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01579 269 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 164 213 IPR011598 GO:0046983
Phac9g01579 269 Gene3D - 163 230 IPR036638 GO:0046983
Phac9g01579 269 MobiDBLite consensus disorder prediction 90 123 - -
Phac9g01579 269 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 20 256 IPR045843 GO:0003700|GO:0006355
Phac9g01579 269 SMART finulus 170 219 IPR011598 GO:0046983
Phac9g01579 269 Pfam Helix-loop-helix DNA-binding domain 173 213 IPR011598 GO:0046983
Phac9g01579 269 FunFam BHLH transcription factor 167 230 - -
Phac9g01579 269 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 168 222 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01579 Phac-Chr9 13064468 13065865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01579 131 221 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 93.407 1.28e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac9g01579 HLH 1.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01579 - - vum:124831293 409.068