Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01578 ATGGCTCTTCTCCTTGACAACTGTGAAGGCATTCTACTCTCTTTGGACTCCCACAAATCAGTGCCAGCTCCTTTCCTCACCAAAACATACCAACTTGTGGATGATCCCGCCACAGATCACATAGTTTCCTGGGGTGAAGACGACACCACTTTCGTCGTTTGGCGTCCTCCTGAGTTCGCTAGAGACCTTCTTCCCAACTACTTCAAACACAACAACTTCTCAAGTTTCGTTCGCCAGCTCAACACCTATGGTTTCAGAAAGATTGTACCAGACCGATGGGAGTTCGCTAACGAATTCTTCAAGAAGGGAGAGAAACACTTGCTGTGCGAGATCCATAGGAGAAAAACCGCTCAGCCTCAACAAGGAAGCATGAATCACCATCACCACCATTCACATTCTCCACTTGGAGTCAACGTTGGCGTTCCCACTTTCTTTCCCTTTTCCAGCAGAGCCAGCATCTCCCCCTCCAACGACTCCGACGACCAAACCAATTGGTGTGACTCTCCTCCACGTGGAGCCACCTCATTGATGAACGGTGCAGCCAACTACAGCACTTCCGTCACCGCGCTTTCCGAGGACAACGAGAGACTCAGGCGAAGCAACAACATGCTCATGTCGGAACTTGCGCACATGAAGAAGCTTTATAACGACATTATCTACTTTGTTCAAAACCATGTCAAGCCAGTGGCTCCAAGCAACTCTTACTCTTCTTCTTTGCTGCTATGCAATACACCTGCTGCTACTCCAATAAATGGTGCCAATGTTTCAATGATGCAAAGGCCAATGAACCAGTTTCTGGGGTATTATTCTACTAACCCTAAGCAAGGAACTACTCCATTAACTCAACATCAGCAACATCAACCTCAGACCTACGTTGTTAACTCCCCCACCAACACATCAAGGAGTTCTATAACGATTGTCGAAGGGCCTAGCGGCAACATTAACAGCTGCAAGACAAAACTATTTGGTGTGTCGCTCCAGTCAAAGAAAAGGGTGCACCCTGATTATGGATCTATTTCAGAGACCAACAAGGCTCGTTTGGTTTTGGATAAGGATGACTTGGGGTTGAATCTCATGCCTCCATCCACTTGTTAG 1095 0.4731 MALLLDNCEGILLSLDSHKSVPAPFLTKTYQLVDDPATDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPQQGSMNHHHHHSHSPLGVNVGVPTFFPFSSRASISPSNDSDDQTNWCDSPPRGATSLMNGAANYSTSVTALSEDNERLRRSNNMLMSELAHMKKLYNDIIYFVQNHVKPVAPSNSYSSSLLLCNTPAATPINGANVSMMQRPMNQFLGYYSTNPKQGTTPLTQHQQHQPQTYVVNSPTNTSRSSITIVEGPSGNINSCKTKLFGVSLQSKKRVHPDYGSISETNKARLVLDKDDLGLNLMPPSTC* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01578 364 Gene3D - 17 116 IPR036388 -
Phac9g01578 364 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac9g01578 364 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac9g01578 364 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac9g01578 364 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac9g01578 364 FunFam Heat stress transcription factor B-4 17 115 - -
Phac9g01578 364 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 288 IPR027725 -
Phac9g01578 364 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac9g01578 364 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Phac9g01578 364 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac9g01578 364 Coils Coil 187 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01578 Phac-Chr9 13042631 13044955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01578 1 363 HSF AT1G46264 55.990 2.64e-125 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Phac9g01578 HSF_DNA-bind 2.8e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01578 K09419 - gmx:100781389 660.988