Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01576 ATGCAAGGGCAGAGAGGTACAGTTGGTCCAATGCCAGAAACCTTAGAATTTGATTGTGGCTCTACGCCAGGTAATTCGACTGTGGATCAGCAGATTTGCTGGAATAATGTGAATCCTGCAGAAAATCAAATACCTGATTATATACTTTCTCCTGGTGATATGAACTCACCTTATGTGAATTCTATTAATCATGAATGGCAAAATTTGAGTGGATGGAGCTTAGGGGAGCCAAGTTCCAGCAATACCCCAAATGAGATTAACAATAATGAGCAAAAACGAGAACTTGGATGGACATCAGCCATTACTGGTAGTGCATTAGAAAGGCACCTTGAACCAACCAATACTCTTTCTCTAGACAATGATAATACAGGTCCTTTGTACATGCGCAGTCCCGATTCTCGTTTGATGTCCCAGAATCTCAACCTAAATGCAGGTCTAGCAGACAGTGGAAGTGATAATAGTCAACATCTGGAGCTCCCTAACTTACACATGTCTAGTGGGTCAGCAAATGAGTGCTTACCATCTACTGTTGGATCTGGTTCTTTTTTGCTTCCTTCTGCAAATAATGGCTTCCTGGTAGAAGGTTCTGATGGTAGGCCAGGTTCTCGTGATACTCGACGTGTCTCTTGTAAAAGAAAGGCTGTTGAAGGAAATAATGGACAATCTTCAGATGCTGGAAGTTCTAGCTACAATCAGCATGCAGATGGTGTTTGGCATGCGATTCCTACTCAGGATAATGCTGGAAGCAGTTCAAACAGAGCTGTATCCTCAGAGCAGGTAAATGCAAGACTTGGCCTGGGAATGGGGGATGAAGCATCTGAAAATGTTCCTGATTCAAACATTGCAGGAAGCTCAGAAAGCTTTCACAGGAATTTCCGGTTGCGGTTAAATCCTTCGAATCAACAAAATTCTGTTCCTCCCGCTGCATTCTCAACTGGGAGCATGATCAGGCAGTCTGGTGTTTCTTCATCCTCTCAAGCATCACAAAGGTTTCATTCTGTTGATAATTCTCTGAATTTGAGATCAGCTCCACCGATAGATAATGTGATTCCTCAAAGCCAGCCACTTGTAATCCATGTTCCTGCTTTGCCTAGGAATAGGCAATCGTTTAGATGGAATGGTGGTTCTAGCTCAAGAAATATCCATTCATCAAACCCAGTTATATGTGCTGACAGAGACCAAGAAGATGCAAGCTCAAGACGAATGTCTAGAAATATTTTAGAACATCCTGTCTTTGTACCTTCAACTGATTTAAGAAATTTGGTTCAAAATCCAACAGTTAGAGCTTCGAGTTCAAGTAGTGAAAATTTAAGTATTCCAGGAAATGTTGCTTCTTCATCACGGACTGGATCCAATCCAGCTACCAACCCTTCATCTGCCTCAAATTGGGTTTCTCGTCCTAATCCTCCACAACATCCACGGAGGCTATCTGAATATGTCCGTCGGTCCTTGTTTTCTCCTGGTTCTGATGTTATTGGAAATCCTAGCAATGCTTATTCTTCCTTGCGCTCTGGTCTTTCTACCTCTGAACCAAGGCCATTATTATCATCTGGAACTGGGGCAAATATGAGATCATCTCCATGGATGGAGAGGCAAGGAGAAAGTGAATTTGGAATTCCTTATTCACTACGTACTCTGGCTGTTGCAAGTGAAGGAAGTAGTAGACTAGTCTCTGAGCTCCGCAATGTGTTGGGCCTTATGCGTAGAGGTGGGAATGTGCGATTCGAGGATGTTGTGATCCTTGATCATCAGTCTTTTCTTTCTGGAATAGCTGATGTTCATGATCGACACAGAGACATGCGACTTGATGTTGATAACATGTCGTACGAGGAGTTGTTGGCTCTGGAAGAGCGCATTGGAAATGTGAGTACTGGATTGAGTGAGGAAACCGTATTGAAATTTTTGAAACAGAAAAAGCACTCGGTTGAAAAAGAAACTCAGATTGATGCAGAACCCTGTTGTGTTTGTCAGGAGGATTATGGTGATGGAGATGATATTGGAACACTTGATTGCGGCCATGATTTCCATAGTGACTGTATCAAACAGTGGCTAATGCATAAGAATCTGTGTCCTATTTGTAAGACAACAGGCTTGGCAACATGA 2103 0.4256 MQGQRGTVGPMPETLEFDCGSTPGNSTVDQQICWNNVNPAENQIPDYILSPGDMNSPYVNSINHEWQNLSGWSLGEPSSSNTPNEINNNEQKRELGWTSAITGSALERHLEPTNTLSLDNDNTGPLYMRSPDSRLMSQNLNLNAGLADSGSDNSQHLELPNLHMSSGSANECLPSTVGSGSFLLPSANNGFLVEGSDGRPGSRDTRRVSCKRKAVEGNNGQSSDAGSSSYNQHADGVWHAIPTQDNAGSSSNRAVSSEQVNARLGLGMGDEASENVPDSNIAGSSESFHRNFRLRLNPSNQQNSVPPAAFSTGSMIRQSGVSSSSQASQRFHSVDNSLNLRSAPPIDNVIPQSQPLVIHVPALPRNRQSFRWNGGSSSRNIHSSNPVICADRDQEDASSRRMSRNILEHPVFVPSTDLRNLVQNPTVRASSSSSENLSIPGNVASSSRTGSNPATNPSSASNWVSRPNPPQHPRRLSEYVRRSLFSPGSDVIGNPSNAYSSLRSGLSTSEPRPLLSSGTGANMRSSPWMERQGESEFGIPYSLRTLAVASEGSSRLVSELRNVLGLMRRGGNVRFEDVVILDHQSFLSGIADVHDRHRDMRLDVDNMSYEELLALEERIGNVSTGLSEETVLKFLKQKKHSVEKETQIDAEPCCVCQEDYGDGDDIGTLDCGHDFHSDCIKQWLMHKNLCPICKTTGLAT* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01576 700 MobiDBLite consensus disorder prediction 73 94 - -
Phac9g01576 700 FunFam E3 ubiquitin-protein ligase MBR2 621 698 - -
Phac9g01576 700 ProSiteProfiles Zinc finger RING-type profile. 653 694 IPR001841 -
Phac9g01576 700 SUPERFAMILY RING/U-box 639 696 - -
Phac9g01576 700 MobiDBLite consensus disorder prediction 371 387 - -
Phac9g01576 700 MobiDBLite consensus disorder prediction 215 232 - -
Phac9g01576 700 Pfam Ring finger domain 653 694 IPR001841 -
Phac9g01576 700 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 156 698 IPR045191 GO:0061630
Phac9g01576 700 MobiDBLite consensus disorder prediction 192 232 - -
Phac9g01576 700 MobiDBLite consensus disorder prediction 112 132 - -
Phac9g01576 700 MobiDBLite consensus disorder prediction 425 474 - -
Phac9g01576 700 MobiDBLite consensus disorder prediction 499 526 - -
Phac9g01576 700 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 616 697 IPR013083 -
Phac9g01576 700 SMART ring_2 653 693 IPR001841 -
Phac9g01576 700 MobiDBLite consensus disorder prediction 199 213 - -
Phac9g01576 700 MobiDBLite consensus disorder prediction 371 400 - -
Phac9g01576 700 MobiDBLite consensus disorder prediction 425 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01576 Phac-Chr9 13007787 13016365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01576 1 700 C3H Transcription Factor Family AT2G15530 32.713 1.48e-76 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01576 - - gmx:100783014 1204.5