Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01571 ATGATGGATACTCCTATCTTACAAAGGGTCTCAGAATGCTTCATCAAAGCAAAACACTCCACCCAAAAATCAAATCAAATCTGCCACTTAACACCTTGGGATATTGCCATGTTATCTGCACACTATATCCAAAAGGGTCTTCTCTACAAGAAGCCTGAACCACTTGTTAATCAACATGATTTCATAGAGAATCTGTTGGAGAAGCTCAAACACTCTCTTTCGTTCACCCTCTCCCATTTCTATCCATTGTCTGGTCGTCTTGTCACCCACAAAACCAAAGACCCTCCCTTCTATGCTGTTTTCGTCGATTGCACAAATAATTCTGGAGTCAGATTCATCCATGCAACTTTAGATATGACCATATCTGATATCCTCTCCCCGGTTGATGTCCCACCCATTGTTCAATCATTGTTTGATCACGACAGAGCACTCAACCACGATGGTCACACCATGCCGCTCTTGTCCATCCAAGTCACTGAACTAGTGGATGGTGTTTTCCTAGGTTGTTCCATGAACCATGCTATTGCTGATGGCACTTCTTATTGGAATTTCTTCAACACGTGGTCCGAGATCTTTCAAGCTCAAGGCTATGAACATGATGTTCCCATATCCCACCCTCCCATTCACAATCGCTGGTTTCCGAATGATTGCGTTCCACCAATCAATCTTCCTTTCAAACACCACGACGAGTTTATCAGCAGGTATGAAGCACCCTTGATGAGAGAGAGAATATTCCACTTTTCAGCAGAGTCTATTGCAAAACTGAAAGCGAAAGCCAACTCGGAATGCAATACCACAAAAATCTCTTCCTTCCAATCACTCTCAGCGCTTGTTTGGAGATGCATAACTCGGGCGCGGCGCTTGGGGCGTGATCAGAAAACAAGTTGCAAGTTATCCACAAACAACCGAAGAAGAATGGAACCGCCTCTGGCTGAGGAGTACTTTGGAAACTCGATTCATACGCTGGGAGCAGGAACAGCCAGGTCAGAGGAATTGCTTGGGAATGGTCTGGGATGGGCAGCATGGAAGCTGCACCTTGCTGTTGTAAACCATAACGACAGAGTGGTGCTGGGATGGGTGAGAGAGTGGTTAGAGTGTCCTCTGATATATCAACTTGGTCGGTATTTTGACCCCTACTGTGTGATGATGGGAAGCTCACCCAGATTCAACATGTATGGTAATGAGTTTGGAATGGGAAAAGCAGTGGCAGTTAGAAGTGGGTATGCCAACAAATTTGATGGAAAAGTTACGTCATATCCAGGCCGTGAAGGAGGAGGAAGCATAGATTTAGAAGTATGTCTTTCGCCACTTGTAATGAGAGCACTAGAATCAGATCAAGAGTTCATGGACTCAGCTTCTTTACCTTCCAGTTCCCCCTAA 1380 0.4493 MMDTPILQRVSECFIKAKHSTQKSNQICHLTPWDIAMLSAHYIQKGLLYKKPEPLVNQHDFIENLLEKLKHSLSFTLSHFYPLSGRLVTHKTKDPPFYAVFVDCTNNSGVRFIHATLDMTISDILSPVDVPPIVQSLFDHDRALNHDGHTMPLLSIQVTELVDGVFLGCSMNHAIADGTSYWNFFNTWSEIFQAQGYEHDVPISHPPIHNRWFPNDCVPPINLPFKHHDEFISRYEAPLMRERIFHFSAESIAKLKAKANSECNTTKISSFQSLSALVWRCITRARRLGRDQKTSCKLSTNNRRRMEPPLAEEYFGNSIHTLGAGTARSEELLGNGLGWAAWKLHLAVVNHNDRVVLGWVREWLECPLIYQLGRYFDPYCVMMGSSPRFNMYGNEFGMGKAVAVRSGYANKFDGKVTSYPGREGGGSIDLEVCLSPLVMRALESDQEFMDSASLPSSSP* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01571 459 Gene3D - 9 219 IPR023213 -
Phac9g01571 459 Pfam Transferase family 15 449 - -
Phac9g01571 459 Gene3D - 232 444 IPR023213 -
Phac9g01571 459 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01571 Phac-Chr9 12882798 12884606 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01571 67 443 Monolignol Biosynthesis Gene Families AT5G48930 29.397 2.94e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01571 - - gmx:100787228 793.882