Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01570 ATGATGAATTCCCCTGTCGTAGGAAGTGTTTCGGAATGTTTTATCAAGCCGTTGGGACCAGCTCAAGATTCAGTAGGAATATGCAATTTAACACCTTGGGATATTGCTATGCTGTCTATGCACTACATCCAGAAGGGTCTACTTTTCAGGAAACCTGCAACACTTGTTGATCGACAAGATTTTATAGAAAATCTGTTGAAGAAGCTCAAGCACTCTCTTTCTCTCACCCTCTTCCATTTTTATCCATTGGCAGGCCACCTTGTCACAAACAAAGGCCCTTCCTCTTATACTATTTTCGTTGATGGCAACAACAATGATGGAGCTAGATTCATCTATGCAACTTTGGATTTGACAATATTTGACATACTCTCCCCTGTTGACGTCCCACCCATTGTTCACTCATTCTTTGACCATCACAAAGCTGTCAACCATGATGGTCACACCATGCCTCTGTTGTCTATTAAAGTCACTGAACTATTGGATGGTGTTTTCATAGGCTGCTCTATGAACCATGCCATAGGCGATGGAACTTCTTATTGGAATTTCTTTAATACATGGTCTGAGATCTTTCAGGCTCAAGCTCAAGGCCATGAATACGGTGTTTCAATTTCACGCCACCCTATTCATAACCGGTGGTTTCCTGATGGTTGTGGTCCCTTGATCAATCTTCCCTTCAAACATCACGACGAGTTTATTAGCAGGTTTGAAGCACCCAAGATGAGAGAGAGAATCTTCCATTTTTCAGCACAGTCTATTGCAAAACTGAAAGCAAGGGCTAACTCAGATTCCAAAACCACCAAAATCTCTTCGTTCCAATCCTTATCAGCTCATGTATGGAGATGCATAACACGCGCACGTCATCTGCCACATGATGAGATAACAAGCTGCAAATTGGCCATAAATAATCGAACAAGAATGGATCCGCCTCTGCCATATGAATACTTTGGAAACTTAATTGGTGTGGTGAGTGCGGGGACAACAGCAGGGGAATTGCTGGAGAATGATCTAGGATGGGCTGCATGGAAGGTGCATCTGGCTGTTGCAAACCAAAACGACAGAGTAGTGCGAAACGCGGTGAAAGAGTGGTTACAACGCCCTGTGGTGTACCAACTTGGTGTGCACTTTGATTCGTGTAGTGTGACGATGTCAAGCTCGCCCAGGTTCGACATGTATGGGAATGAATTTGGGATGGGAAGAGCTGTGGCAGTTCTAAGTGGATATGCCAACAAATTTGATGGGAGTGTGACTTCATATCCAGGATCCGAAGGAGGGGGAAGCATAGATTTGGAACTCTCCCTTTCGCCCTATGCAATGACCTTACTAGAATCGGATGAGGAGTTTATGCAAGCTGTTTCTGTGTCCAATTCCCTACACTATCAACTTTGTTGA 1389 0.4392 MMNSPVVGSVSECFIKPLGPAQDSVGICNLTPWDIAMLSMHYIQKGLLFRKPATLVDRQDFIENLLKKLKHSLSLTLFHFYPLAGHLVTNKGPSSYTIFVDGNNNDGARFIYATLDLTIFDILSPVDVPPIVHSFFDHHKAVNHDGHTMPLLSIKVTELLDGVFIGCSMNHAIGDGTSYWNFFNTWSEIFQAQAQGHEYGVSISRHPIHNRWFPDGCGPLINLPFKHHDEFISRFEAPKMRERIFHFSAQSIAKLKARANSDSKTTKISSFQSLSAHVWRCITRARHLPHDEITSCKLAINNRTRMDPPLPYEYFGNLIGVVSAGTTAGELLENDLGWAAWKVHLAVANQNDRVVRNAVKEWLQRPVVYQLGVHFDSCSVTMSSSPRFDMYGNEFGMGRAVAVLSGYANKFDGSVTSYPGSEGGGSIDLELSLSPYAMTLLESDEEFMQAVSVSNSLHYQLC* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01570 462 FunFam Tryptamine hydroxycinnamoyl transferase 226 444 - -
Phac9g01570 462 Gene3D - 3 219 IPR023213 -
Phac9g01570 462 Gene3D - 229 443 IPR023213 -
Phac9g01570 462 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 449 - -
Phac9g01570 462 Pfam Transferase family 14 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01570 Phac-Chr9 12870228 12874524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01570 69 442 Monolignol Biosynthesis Gene Families AT5G48930 28.288 5.33e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01570 - - vum:124831304 832.017