Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01566 ATGGGTACTCCTGCAGTTCAACACATTTCAGAATGTTTTGTGAAGCCTCACCCCTACAACAACTTCCCCAACCAAATCTGTAATCTAACACCATGGGATATTGCCATGTTGTCTGTGGGCTATATCCAGAAGGGTTTGCTCTTCAGCAAGCCTGCAACTCTTGAGGATCAACAACATTTCATGGAGAATCTGTTGGAGAAGCTCAAGCACTCTCTTTCTCTCACCCTCTCCCATTTCTATCCACTCTCTGGTCGTCTTGTCACCCACAAAACCCAACACCCTCCCTCTTATACTGTTTCTGTTGATTGCAACAACAGTGATGGAGCTCGATTCATCTATGCAGCCTTAGATGTCACCATATCTGACTTACTCTCCCCAGTTGACATCCCTTCCGTTTTTCACTCGTTCTTTGACCACCACAAAGCACTCAACCATGACGGTCACACCATGCCCTTGTTGTCCATCCAAGTCACTGAACTAGTGGATGGTGTTTTCATAGGTTGCTCCATGAATCACTCTGTAGCAGATGGCACTTCGTTTTGGAATTTCTTCAATACATGGTCGCAGATCTTTCAAGCACAATCTCAGGCTGAAAGCCATGAATACGATGTTCCCATCTCACACCAACCCCTTCACAATGGTTGGTTTCCAAATAATTGTAGTCCACCAATCTCTCTTCCTTTCAAACATCATGACGAGTTTATCAATAGATTTGAAGCGCCCTTGCTGAGAGAGAGAATCTTCCACTTTTCAGCAGAGTCTATAGCAAAACTGAAAGCCAAGGCCAACTCAGAATCTAATACCACAAGAATCTCTTCTTTCCAGTCATTATCAGCACTTCTTTGGAGATCGATAACTCGTGCGCGCTCCCGACCGTCTGACAAAAAAGCAATTTGCAGATTAATGGCAAACAATCGATCAAGAATAGAGCCCCCTCTGCCTGAAGAATACTTTGGAAACTGCGCTCTTGCACTGAGTGCAGAAACGACAACAGGGGAATTGCTTGAGAATGGTCTAGGATGGGCAGCATGGAAGTTGCATATGGCTGTTACAAACCTTAACGAAGTGGTGTTAGAATTTCTGGAAGGATGGTTAGAGTCTCCTTCCATATTTCAAATGGGTCATTTAGTTGACCCGTACAGCGTGTTGACGGCTAGCTCGCCCAGGTTCAATATGTATGGGAGTGAATTTGGAATGGGGAAAGCGGTGGCTGTTAGAAGTGGGTATGCAAATAAATTTGATGGGAAAGTGACATCATACCCAGGGCGGGAAGGAGGAGGAAGCATTGATTTGGAAGTTTGCCTTTTGCCACATACAATGAGTGCTTTGGAATCAGACAAGGAGTTCATGGATGCAGTTTCTGTGTTCAATCCCTTGCTGTTTTAG 1386 0.4473 MGTPAVQHISECFVKPHPYNNFPNQICNLTPWDIAMLSVGYIQKGLLFSKPATLEDQQHFMENLLEKLKHSLSLTLSHFYPLSGRLVTHKTQHPPSYTVSVDCNNSDGARFIYAALDVTISDLLSPVDIPSVFHSFFDHHKALNHDGHTMPLLSIQVTELVDGVFIGCSMNHSVADGTSFWNFFNTWSQIFQAQSQAESHEYDVPISHQPLHNGWFPNNCSPPISLPFKHHDEFINRFEAPLLRERIFHFSAESIAKLKAKANSESNTTRISSFQSLSALLWRSITRARSRPSDKKAICRLMANNRSRIEPPLPEEYFGNCALALSAETTTGELLENGLGWAAWKLHMAVTNLNEVVLEFLEGWLESPSIFQMGHLVDPYSVLTASSPRFNMYGSEFGMGKAVAVRSGYANKFDGKVTSYPGREGGGSIDLEVCLLPHTMSALESDKEFMDAVSVFNPLLF* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01566 461 Gene3D - 8 220 IPR023213 -
Phac9g01566 461 Pfam Transferase family 18 450 - -
Phac9g01566 461 Gene3D - 234 445 IPR023213 -
Phac9g01566 461 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01566 Phac-Chr9 12821907 12823598 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01566 66 444 Monolignol Biosynthesis Gene Families AT5G48930 26.601 2.93e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01566 - - vra:106761257 754.592