Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01562 ATGATTACTCCTGTCGTTCGACGCATTTCCGAATGCTTTGTCAAACCACATGGTTTAACAGAAGTGTCAAACGAAACATGCCATTTAACACATTGGGATATTTCCCTGTTGTCTAAGCACTATATCCAGAAGGGTCTACTCTTCAAGAAGCCTGAAACCCTTGTTGATCAACATGATTTCATACAAAATCTGTTGGACAAGCTTAAACACTCTCTTTCTCTCACCCTCTCCCATTTCTATCCATTGTCTGGTCGCCTTGTCACCCACAAAACCCAAAACCCTCCTTCTTATGCTATATTCGTTGATTGCAACAACAGTGATGGAGTTAGATTCACTCATGCAACTCTTGATGTCACCATATCTGACATACTCTCCCCAGTTGACACCCCATCCATTTTTCACTCATTCTTTGACCACCACAAAGCAGTCAACCATGACGGTCACACCATGCCGCTGCTGTCCATCCAAGTCACTGAACTAGTGGATGGTGTTTTCATAGGTTGTTCCATGAATCACTCTGTCGGTGATGGCACTTCGTATTGGAATTTCTTCAATACATGGTCTAAGATCTTTCAAGCTCAACCTCAGGGCCAAGAAAATTATGTGCCCATTTTGCACCAACCTATTCACAACCGCTGGTTTCCAAATAATTGCAGTCCACCAATCAATCTTCCTTTCAAACATCACGACGAGTTTATCAATAGATTTGAAGCGCCCTTGCTGAGAGAGAGAATCTTCCACTTTTCAGCTGAGTCTATAGCAAAACTGAAAGCAAAGGCAAACTCAGAGTCCAAGAGTAATACCACGAAAATCTCTTCGTTCCAGTCATTATCAGCACTTGTTTGGAGATCCATCATTCGTGCATGCTCCCTACCATATGAGCAAAGAACAAGTTTCAAGCTAACTGCAAACAATCGGTCAAGAATGGAACCGCCTCTGCCTCATGAATACTTTGGAAACTCGGTTAATACTTTGAGTGCTGAAACGACAGTGGGGGAATTACTTGAGAATGATCTAGGATGGGCTGCATGGAAGTTGCACCTTGCTGTTACAAGACACAATGACAAAGAGGTGATGCAATCAATCCAAGAATGGTTACAGTGTCCGGTGATCAAAAAAATTTGTCAGCCCTTGGAGCCGTACCTTGTGTTGATAAGTAGCTCACCCAGGTTCAACATGTATGGGAATGAGTTTGGAATGGGGAAAGCAGTGGCAGTAAGAAGTGGATATGCCAACAAATTTGATGGGAAGGTGACATCATATCCAGGTCGTGAAGGAGGGGGAAGCATCGATTTGGAAATCTGCCTTTTACCACATATAATGACCTCTCTTGAATCAGACATGGACTTTATGAATGCAGTTTCGATAATTAAGTTTGGTAATATTTATGTCAATGAACAAGTTATTGTTGAGTTATTGCGTCGAATGAAGAGTTTCGCGATGAATTGGTTGAAGAAGTGTTTCATAAAATTGGATGTGGAATTAGGAAGGACAAATCAAGAAAGGATGAAGTTTCTAGAATGA 1524 0.4173 MITPVVRRISECFVKPHGLTEVSNETCHLTHWDISLLSKHYIQKGLLFKKPETLVDQHDFIQNLLDKLKHSLSLTLSHFYPLSGRLVTHKTQNPPSYAIFVDCNNSDGVRFTHATLDVTISDILSPVDTPSIFHSFFDHHKAVNHDGHTMPLLSIQVTELVDGVFIGCSMNHSVGDGTSYWNFFNTWSKIFQAQPQGQENYVPILHQPIHNRWFPNNCSPPINLPFKHHDEFINRFEAPLLRERIFHFSAESIAKLKAKANSESKSNTTKISSFQSLSALVWRSIIRACSLPYEQRTSFKLTANNRSRMEPPLPHEYFGNSVNTLSAETTVGELLENDLGWAAWKLHLAVTRHNDKEVMQSIQEWLQCPVIKKICQPLEPYLVLISSSPRFNMYGNEFGMGKAVAVRSGYANKFDGKVTSYPGREGGGSIDLEICLLPHIMTSLESDMDFMNAVSIIKFGNIYVNEQVIVELLRRMKSFAMNWLKKCFIKLDVELGRTNQERMKFLE* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01562 507 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 451 - -
Phac9g01562 507 Gene3D - 232 447 IPR023213 -
Phac9g01562 507 Gene3D - 8 221 IPR023213 -
Phac9g01562 507 Pfam Transferase family 13 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01562 Phac-Chr9 12784180 12789531 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01562 68 436 Monolignol Biosynthesis Gene Families AT5G48930 28.608 7.38e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01562 - - gmx:100787276 782.711