Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01557 ATGGAAGGAGAAGGTTTAGGAGATTGCTGTTCCTCCAACTCCACCACCACCAGGAACAGCCAGAAACGGAAGCAGCAACAGCAACAACAGCACCAAGACAAACCATACAGAGGAATAAGGATGAGGAAGTGGGGGAAGTGGGTGGCGGAGATTAGAGAGCCCAACAAGAGGTCCAGAATCTGGTTGGGTTCTTACGCAACCCCCGTCGCCGCAGCACGCGCCTACGACACCGCCGTCTTCTACCTCAGAGGCCCTTCCGCTCGCCTCAACTTCCCCGAACTGCTCTCCCAAGACGACGACGTTTCGACCCAACCGGGCAACATGTCCGCCGATTCTATACGCAAGAAAGCGACCCAAGTCGGCGCGAGAGTCGACGCGCTCCAAACCGCGCTTCAACCCTCGTCGTCCCACTCCGCTAATTCCAGCCACGTCAGCTCTGACAAACCAGACTTGAACGAGTATCCTAAACCCGAAGACTAG 480 0.5646 MEGEGLGDCCSSNSTTTRNSQKRKQQQQQQHQDKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYATPVAAARAYDTAVFYLRGPSARLNFPELLSQDDDVSTQPGNMSADSIRKKATQVGARVDALQTALQPSSSHSANSSHVSSDKPDLNEYPKPED* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01557 159 Gene3D AP2/ERF domain 35 93 IPR036955 GO:0003700|GO:0006355
Phac9g01557 159 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 13 159 - -
Phac9g01557 159 MobiDBLite consensus disorder prediction 128 148 - -
Phac9g01557 159 MobiDBLite consensus disorder prediction 8 26 - -
Phac9g01557 159 Pfam AP2 domain 36 84 IPR001471 GO:0003700|GO:0006355
Phac9g01557 159 CDD AP2 36 94 IPR001471 GO:0003700|GO:0006355
Phac9g01557 159 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Phac9g01557 159 MobiDBLite consensus disorder prediction 1 38 - -
Phac9g01557 159 MobiDBLite consensus disorder prediction 97 159 - -
Phac9g01557 159 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Phac9g01557 159 PRINTS Ethylene responsive element binding protein signature 74 94 IPR001471 GO:0003700|GO:0006355
Phac9g01557 159 SUPERFAMILY DNA-binding domain 35 93 IPR016177 GO:0003677
Phac9g01557 159 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Phac9g01557 159 MobiDBLite consensus disorder prediction 97 114 - -
Phac9g01557 159 FunFam Ethylene-responsive transcription factor 2 34 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01557 Phac-Chr9 12705186 12707639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01557 1 132 AP2-EREBP Transcription Factor Family AT5G67190 61.364 6.40e-51 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac9g01557 AP2 5.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01557 K09286 - gmx:100801528 249.98