Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01544 ATGGCCAATCACCACCACTATCATCATGCACATGACACCAACCTCAAATCCCTTCTCGACACCCTATACTGCTCCGAAGAGCATTGGGAGGAACACGTTGGGGAAGATGAATTAGACCAAACAGAGGATGATTACCTAAGCGCTAATAATACTACTAATAATAACACTACCAGTGGCAGCACTATAATAAACTCCCTTCACTCCCCTCATGTGTTGTCGGAAAGCGACATGTTTTGTGACGAGCAAGAGTTGGCATCGCTGCTGGGGAAAGAACAACACAACCCTCTAAGCACTTGCCTCCAAACCAACCCTGCGTTGGAGTCTGCTCACAGAGAAGGCGTGGAGTGGATGCTCAGAGTGAACGCTCACTACTCCTTCTCTGCTCTCACAGCTCTTCTTGCCGTCAACTACTTTGACCGCTTCCTCTCCACCCTCCACTTTCAGGATGGCAAGCCATGGATGACTCATCTCGCTGCCGTCGCTTGCCTCTCTCTCGCTGCCAAAGTGGAGGAGACACAAGTTCCCCTTCTCCTAGACCTTCAAGTGGAGGAGGGTAGATACTTGTTCGAAGCCAAAACGATTAAAAGGATGGAGATTTTGGTACTTTCCACTCTTGGATGGAAGATGAACCCGCCAACCCCTCTGTCCTTTCTTGATTACATCACAAGAAGACTTGGATTGAAGGATCATCTCTGCTGGGAGTTCCTCAGGAAGTGCGAAGACCTTCTTGTCTCTGTCCTCGGAGATTGGAGGTTAATGGGTTATCTACCGTCTGAATTGGCAAGTGCTACGATGATGCACGTTGTGAAAAGCGTGAAGCCTTGTCTAGAAGGTGAATACCAGAGGCAACTCTTGGGTATTCTGGGATTCAACAAGGAGAAGGTGAACGAGTGTAGGAAGGTGTTGGAATTGTGGTCAGGGTACGGGAAGCAGGGGAAGCAATGCACGAAACGCAAGTTTGTAAGCGTTCCAGGAAGTCCAAACGGCGTGATGGAGATGTCGTTTAGCTGTGATAGCTCGAATGAGTCGTGGGCAGTAGCTGCTGCAGCAGCTGCTGCTGCTGCTTCAGTGTCTTCTTCACCGGAACCTTTGTCGAAGAAGAGTAGAAGTGAAGTAAAGCGATAA 1125 0.4907 MANHHHYHHAHDTNLKSLLDTLYCSEEHWEEHVGEDELDQTEDDYLSANNTTNNNTTSGSTIINSLHSPHVLSESDMFCDEQELASLLGKEQHNPLSTCLQTNPALESAHREGVEWMLRVNAHYSFSALTALLAVNYFDRFLSTLHFQDGKPWMTHLAAVACLSLAAKVEETQVPLLLDLQVEEGRYLFEAKTIKRMEILVLSTLGWKMNPPTPLSFLDYITRRLGLKDHLCWEFLRKCEDLLVSVLGDWRLMGYLPSELASATMMHVVKSVKPCLEGEYQRQLLGILGFNKEKVNECRKVLELWSGYGKQGKQCTKRKFVSVPGSPNGVMEMSFSCDSSNESWAVAAAAAAAAASVSSSPEPLSKKSRSEVKR* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01544 374 Pfam Cyclin, C-terminal domain 212 320 IPR004367 -
Phac9g01544 374 MobiDBLite consensus disorder prediction 355 374 - -
Phac9g01544 374 CDD CYCLIN_AtCycD-like_rpt2 213 302 - -
Phac9g01544 374 Pfam Cyclin, N-terminal domain 93 210 IPR006671 -
Phac9g01544 374 CDD CYCLIN_AtCycD-like_rpt1 111 207 - -
Phac9g01544 374 PANTHER CYCLINS 86 303 IPR039361 -
Phac9g01544 374 SUPERFAMILY Cyclin-like 82 210 IPR036915 -
Phac9g01544 374 Gene3D - 96 210 - -
Phac9g01544 374 Gene3D - 93 300 - -
Phac9g01544 374 SMART Cyclin_C_2 212 339 IPR004367 -
Phac9g01544 374 SMART cyclin_7 115 203 IPR013763 -
Phac9g01544 374 FunFam CYCLIN D32 211 300 - -
Phac9g01544 374 SUPERFAMILY Cyclin-like 195 303 IPR036915 -
Phac9g01544 374 FunFam D6-type cyclin 93 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01544 Phac-Chr9 12566108 12568785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01544 76 371 Core Cell Cycle Gene Families AT5G67260 51.342 6.83e-90 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01544 K14505 - gmx:100811122 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01544 9 12566108 12568785 Phac7g00590 7 3286511 3289103 ECH
Phac9g01544 9 12566108 12568785 Phac9g01544 9 12566108 12568785 ECH