Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01540 ATGGCTTCGGCGAAGGACATGGATCGGATTAAAGGGCCATGGAGTCCCGAAGAGGACGAAGCCTTGCGGAGGTTGGTTCAGATTTACGGGCCCAGAAACTGGTCCCTCATAAGCAAATCCATTCCGGGTCGGTCTGGGAAATCGTGTCGGTTGCGGTGGTGCAATCAGCTGTCGCCCGAGGTTGAGCACCGGCCTTTCACGGCAAAGGAAGACGAAACGATCGTGAAGGCACACGCCAGGTTCGGAAACAAGTGGGCCACCATCGCTCGCTTCCTCAACGGCCGCACCGACAACGCCATCAAGAACCATTGGAATTCCACACTAAAGAGGAAATGCTCCGAACCTCCCTCCGACCCTCGGCCTCTGAAAAGAGTCGCCAGTGGTTCGGATAGTCCATCCGGATCCGATTTGAGCGATTCGGGTTTACCCGCTACTTCTCCAACCCCTATTTACCAACCTCTTGCTGGGAGCGTAAGCGTGAGCCTCGTGCCCTCTACCCTGCTTGCGGAAACTGCGTCTTCTTCTGCAACTGATATCGCCACGTTACTGAGTCTGTCTCTACCTGGATCCAATTCGTGCAATGGAGCTAGCAATGGGCCTGGGCCTGGGCCTGGGACGAACGAGGAGCCCAGTTGCGAGCGGAGGCAGGAGTTGAGGATTGGTTCGGAGCAGTTTTTGAGCGAAGAGTTGTTGAAGGTGATGCAAGATATGATACGAGTGGAAGTGAGGAATTACATTTCTGGATTGGAACGTAACGGGGTGTTTATGCAAAACGATACCATTGGAAACGTGGTTTTAAAGAGGATGGGAATTGGAATGCTCGAATAG 828 0.5362 MASAKDMDRIKGPWSPEEDEALRRLVQIYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRPFTAKEDETIVKAHARFGNKWATIARFLNGRTDNAIKNHWNSTLKRKCSEPPSDPRPLKRVASGSDSPSGSDLSDSGLPATSPTPIYQPLAGSVSVSLVPSTLLAETASSSATDIATLLSLSLPGSNSCNGASNGPGPGPGTNEEPSCERRQELRIGSEQFLSEELLKVMQDMIRVEVRNYISGLERNGVFMQNDTIGNVVLKRMGIGMLE* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01540 275 Gene3D - 64 127 - -
Phac9g01540 275 PANTHER MYB PROTEIN-RELATED 11 144 - -
Phac9g01540 275 CDD SANT 65 108 IPR001005 -
Phac9g01540 275 SUPERFAMILY Homeodomain-like 8 104 IPR009057 -
Phac9g01540 275 FunFam MYB transcription factor 11 62 - -
Phac9g01540 275 SMART sant 62 110 IPR001005 -
Phac9g01540 275 SMART sant 10 59 IPR001005 -
Phac9g01540 275 ProSiteProfiles Myb-like domain profile. 6 57 IPR001005 -
Phac9g01540 275 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Phac9g01540 275 MobiDBLite consensus disorder prediction 128 149 - -
Phac9g01540 275 CDD SANT 13 55 IPR001005 -
Phac9g01540 275 MobiDBLite consensus disorder prediction 106 149 - -
Phac9g01540 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 112 IPR017930 -
Phac9g01540 275 MobiDBLite consensus disorder prediction 193 213 - -
Phac9g01540 275 Pfam Myb-like DNA-binding domain 11 57 IPR001005 -
Phac9g01540 275 Pfam Myb-like DNA-binding domain 65 107 IPR001005 -
Phac9g01540 275 Gene3D - 10 62 - -
Phac9g01540 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01540 Phac-Chr9 12520657 12522108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01540 5 254 MYB Transcription Factor Family AT4G37260 49.492 1.30e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac9g01540 Myb_DNA-binding 7.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01540 K09422 - gmx:778037 359.377