Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01521 ATGGAGACTCGGGCTGCGGCAAAGAGAAAGAAGGAAAGTGTTGTGGTGGTGGAAAAGCAGCACCCCAAGAAGCGTCGGGTTGTATTGGGTGAACTCTCCAATTTACAAAACCTTATTGTCCCCAAAACTCAAGATCTGAACAAACAGAAACGGCAGTGTCTGAAAAATTCCAATATCAAGAAACTATCTTCCCTAAATAATACCCTTTCTTCTCACCAGATTGACCAACAGTATGTTTCCAACATCGATGAGTATCTTCTTGCAATGGAGACAAAGAGAAGACCAATGGTTAACTACATGGACAAAGTTCAGTTGGTAGTTACCACAAACATGAGAGAAATATTGGTGGATTGGTTAGTAGATGTTGCTGTGGAGTATAAGCTTCTCTCTGAAACTCTTCATCTCTCTGTGTCATATATAGATAGGTTTTTATCTGTTAGTCCTGTGACCAAATCGAGGCTTCAGTTACTGGGTGTTTCTTGTATGCTCATTGCTTCGAAGTACGAGGAAACTAATCCACCCCGTGTGGAGAAATTTTGCAGCATCACTGATAACACTTATGAAAAGAAAGAGGTTGTAAAGATGGAAGCTGAAATACTCCAGTCCCTAAACTTTGAAATGGGCAATCCTACTGCAATCACCTTTCTAAAGAGGTTTTTGGGTGTTGCTTCTGTGAATCAAAAAACACCAAATTTGAAGGTTGAGTTTCTGAGCTTCTACCTTGCTGAGCTAAGTTTGTTGGATTATGATTGTATACGATTCTTGCCTTCTATTGTGGCAGCATCTGCTTTATTTCTTGCCTGTTTTATTATCTCCCCTGAAGTGCATCCTTGGACTTCTTCCCTGCGTGAATGGTCAGGTTACAAACCAGTTGAGTTGAAAGTTTGTGTTCTCACTTTGCATGACTTGTATTTTTCAAGAAAGGCAGCATCTTCCCGATCTGTTAGGGATAAATATAAGCATCACAAGTTCAAGTATGTGGCGAACCTGCCGTCTCCTCCACATGTACCAAGTTATTACTTTGAAGATTAG 1032 0.405 METRAAAKRKKESVVVVEKQHPKKRRVVLGELSNLQNLIVPKTQDLNKQKRQCLKNSNIKKLSSLNNTLSSHQIDQQYVSNIDEYLLAMETKRRPMVNYMDKVQLVVTTNMREILVDWLVDVAVEYKLLSETLHLSVSYIDRFLSVSPVTKSRLQLLGVSCMLIASKYEETNPPRVEKFCSITDNTYEKKEVVKMEAEILQSLNFEMGNPTAITFLKRFLGVASVNQKTPNLKVEFLSFYLAELSLLDYDCIRFLPSIVAASALFLACFIISPEVHPWTSSLREWSGYKPVELKVCVLTLHDLYFSRKAASSRSVRDKYKHHKFKYVANLPSPPHVPSYYFED* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01521 343 ProSitePatterns Cyclins signature. 112 143 IPR006671 -
Phac9g01521 343 PIRSF Cyclin_A_B_D_E 1 339 IPR046965 GO:0016538|GO:0044772
Phac9g01521 343 SUPERFAMILY Cyclin-like 72 207 IPR036915 -
Phac9g01521 343 SMART Cyclin_C_2 210 333 IPR004367 -
Phac9g01521 343 PANTHER CYCLINS 52 321 IPR039361 -
Phac9g01521 343 Pfam Cyclin, C-terminal domain 210 332 IPR004367 -
Phac9g01521 343 Gene3D - 82 329 - -
Phac9g01521 343 FunFam Cyclin superfamily protein, putative 207 279 - -
Phac9g01521 343 SMART cyclin_7 117 201 IPR013763 -
Phac9g01521 343 SMART cyclin_7 214 302 IPR013763 -
Phac9g01521 343 FunFam G2/mitotic-specific cyclin 95 206 - -
Phac9g01521 343 SUPERFAMILY Cyclin-like 210 335 IPR036915 -
Phac9g01521 343 Gene3D - 95 208 - -
Phac9g01521 343 Pfam Cyclin, N-terminal domain 84 207 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01521 Phac-Chr9 12342781 12345312 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01521 3 343 Core Cell Cycle Gene Families AT5G43080 54.203 6.88e-125 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01521 K06627 - gmx:100786875 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01521 9 12342781 12345312 Phac9g01521 9 12342781 12345312 ECH