Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01520 ATGGAGACTCGGGCTGCGGCAAAGAGAAAGAAGGAAAGTGTTGTGGTGGTGGAAAAGCAGCACCCCAAGAAGCGTCGGGTTGTATTGGGTGAACTCTCCAATTTACAAAACCTTATTGTCCCCAAAACTCAAGATCTGAACAAACAGAAACGGCAGTGTCTGAAAAATTCCAATATCAAGAAACTATCTTCCCTAAATAATACCCTTTCTTCTCACCAGATTGACCAACAGTATGTTTCCAACATCGATGAGTATCTTCTTGCAATGGAGACAAAGAGAAGACCAATGGTTAACTACATGGACAAAGTTCAGTTGGTAGTTACCACAAACATGAGAGAAATATTGGTGGATTGGTTAGTAGATGTTGCTGTGGAGTATAAGCTTCTCTCTGAAACTCTTCATCTCTCTGTGTCATATATAGATAGGTTTTTATCTGTTAGTCCTGTGACCAAATCGAGGCTTCAGTTACTGGGTGTTTCTTGTATGCTCATTGCTTCGAAGTACGAGGAAACTAATCCACCCCGTGTGGAGAAATTTTGCAGCATCACTGATAACACTTATGAAAAGAAAGAGGTTGTAAAGATGGAAGCTGAAATACTCCAGTCCCTAAACTTTGAAATGGGCAATCCTACTGCAATCACCTTTCTAAAGAGGTTTTTGGGTGTTGCTTCTGTGAATCAAAAAACACCAAATTTGAAGGTTGAGTTTCTGAGCTTCTACCTTGCTGAGCTAAGTTTGTTGGATTATGATTGTATACGATTCTTGCCTTCTATTGTGGCAGCATCTGCTTTATTTCTTGCCTGTTTTATTATCTCCCCTGAAGTGCATCCTTGGGTTACAAACCAGTTGAGTTGA 855 0.4035 METRAAAKRKKESVVVVEKQHPKKRRVVLGELSNLQNLIVPKTQDLNKQKRQCLKNSNIKKLSSLNNTLSSHQIDQQYVSNIDEYLLAMETKRRPMVNYMDKVQLVVTTNMREILVDWLVDVAVEYKLLSETLHLSVSYIDRFLSVSPVTKSRLQLLGVSCMLIASKYEETNPPRVEKFCSITDNTYEKKEVVKMEAEILQSLNFEMGNPTAITFLKRFLGVASVNQKTPNLKVEFLSFYLAELSLLDYDCIRFLPSIVAASALFLACFIISPEVHPWVTNQLS* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01520 284 ProSitePatterns Cyclins signature. 112 143 IPR006671 -
Phac9g01520 284 SMART cyclin_7 117 201 IPR013763 -
Phac9g01520 284 SMART cyclin_7 214 284 IPR013763 -
Phac9g01520 284 FunFam Cyclin superfamily protein, putative 207 279 - -
Phac9g01520 284 Gene3D - 82 278 - -
Phac9g01520 284 PIRSF Cyclin_A_B_D_E 1 283 IPR046965 GO:0016538|GO:0044772
Phac9g01520 284 Pfam Cyclin, C-terminal domain 210 278 IPR004367 -
Phac9g01520 284 Gene3D - 95 208 - -
Phac9g01520 284 FunFam G2/mitotic-specific cyclin 95 206 - -
Phac9g01520 284 Pfam Cyclin, N-terminal domain 84 207 IPR006671 -
Phac9g01520 284 PANTHER CYCLINS 51 268 IPR039361 -
Phac9g01520 284 SUPERFAMILY Cyclin-like 72 207 IPR036915 -
Phac9g01520 284 SUPERFAMILY Cyclin-like 210 279 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01520 Phac-Chr9 12342781 12345312 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01520 3 278 Core Cell Cycle Gene Families AT5G43080 55.714 1.54e-100 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01520 K06627 - gmx:100786875 399.823