Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01519 ATGGAGACTCGGGCTGCGGCAAAGAGAAAGAAGGAAAGTGTTGTGGTGGTGGAAAAGCAGCACCCCAAGAAGCGTCGGGTTGTATTGGGTGAACTCTCCAATTTACAAAACCTTATTGTCCCCAAAACTCAAGATCTGAACAAACAGAAACGGCAGTGTCTGAAAAATTCCAATATCAAGAAACTATCTTCCCTAAATAATACCCTTTCTTCTCACCAGATTGACCAACAGTATGTTTCCAACATCGATGAGTATCTTCTTGCAATGGAGATTCAGACAAAGAGAAGACCAATGGTTAACTACATGGACAAAGTTCAGTTGGTAGTTACCACAAACATGAGAGAAATATTGGTGGATTGGTTAGTAGATGTTGCTGTGGAGTATAAGCTTCTCTCTGAAACTCTTCATCTCTCTGTGTCATATATAGATAGGTTTTTATCTGTTAGTCCTGTGACCAAATCGAGGCTTCAGTTACTGGGTGTTTCTTGTATGCTCATTGCTTCGAAGTACGAGGAAACTAATCCACCCCGTGTGGAGAAATTTTGCAGCATCACTGATAACACTTATGAAAAGAAAGAGGTTGTAAAGATGGAAGCTGAAATACTCCAGTCCCTAAACTTTGAAATGGGCAATCCTACTGCAATCACCTTTCTAAAGAGGTTTTTGGGTGTTGCTTCTGTGAATCAAAAAACACCAAATTTGAAGGTTGAGTTTCTGAGCTTCTACCTTGCTGAGCTAAGTTTGTTGGATTATGATTGTATACGATTCTTGCCTTCTATTGTGGCAGCATCTGCTTTATTTCTTGCCTGTTTTATTATCTCCCCTGAAGTGCATCCTTGGACTTCTTCCCTGCGTGAATGGTCAGGTTACAAACCAGTTGAGTTGAAAGTTTGTGTTCTCACTTTGCATGACTTGTATTTTTCAAGAAAGGCAGCATCTTCCCGATCTGTTAGGGATAAATATAAGCATCACAAGTTCAAGTATGTGGCGAACCTGCCGTCTCCTCCACATGTACCAAGTTATTACTTTGAAGATTAG 1038 0.4046 METRAAAKRKKESVVVVEKQHPKKRRVVLGELSNLQNLIVPKTQDLNKQKRQCLKNSNIKKLSSLNNTLSSHQIDQQYVSNIDEYLLAMEIQTKRRPMVNYMDKVQLVVTTNMREILVDWLVDVAVEYKLLSETLHLSVSYIDRFLSVSPVTKSRLQLLGVSCMLIASKYEETNPPRVEKFCSITDNTYEKKEVVKMEAEILQSLNFEMGNPTAITFLKRFLGVASVNQKTPNLKVEFLSFYLAELSLLDYDCIRFLPSIVAASALFLACFIISPEVHPWTSSLREWSGYKPVELKVCVLTLHDLYFSRKAASSRSVRDKYKHHKFKYVANLPSPPHVPSYYFED* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01519 345 PIRSF Cyclin_A_B_D_E 1 341 IPR046965 GO:0016538|GO:0044772
Phac9g01519 345 SUPERFAMILY Cyclin-like 74 209 IPR036915 -
Phac9g01519 345 FunFam G2/mitotic-specific cyclin 97 208 - -
Phac9g01519 345 SUPERFAMILY Cyclin-like 212 337 IPR036915 -
Phac9g01519 345 PANTHER CYCLINS 52 323 IPR039361 -
Phac9g01519 345 Pfam Cyclin, N-terminal domain 85 209 IPR006671 -
Phac9g01519 345 Pfam Cyclin, C-terminal domain 212 334 IPR004367 -
Phac9g01519 345 Gene3D - 95 210 - -
Phac9g01519 345 SMART cyclin_7 119 203 IPR013763 -
Phac9g01519 345 SMART cyclin_7 216 304 IPR013763 -
Phac9g01519 345 Gene3D - 82 331 - -
Phac9g01519 345 SMART Cyclin_C_2 212 335 IPR004367 -
Phac9g01519 345 FunFam Cyclin superfamily protein, putative 209 281 - -
Phac9g01519 345 ProSitePatterns Cyclins signature. 114 145 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01519 Phac-Chr9 12342781 12345312 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01519 3 345 Core Cell Cycle Gene Families AT5G43080 53.890 1.69e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01519 K06627 - gmx:100786875 510.76