Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01515 ATGGAGACCCGCGCCGCAGCAAAGAGAAAGGCAACCGCTGCTGTTGCCACCGTGGTCGTGGTCGAAAAGCCACACCCCAAAAGGCAGCGTGTTGTGTTGGGTGAACTTTCAAATTATCCAAACGCTGTTGTCTCCGAAACTCAAAATCAACGCAAAGAGAAACTGCAATGTCGGAAGAATCCAAATTTGAAGAAATCATCTCCCGCGAAGTCCACTCCCCTTTCCTCCCAGATTGTCCAACCTTATGTTTCCGACATCTATCAGTATCTGCATGCAATGGAGATGCAGAGGAAGAGGAGACCAATGGTTGATTACATTGAGAAAGTTCAGAGAGAAGTTACTGTAATCATGAGGACAATATTGGTGGATTGGCTAGTAGAGGTAGCTGAAGAGTACAAGCTTCAATCAGACACCCTTCATCTCTCTGTTTCATACATAGATAGGTTTTTATCGGTTAATCCTGTTAGTAAGTCAAGACTTCAATTACTGGGTATTTCGTCCATGCTCATTGCTGCTAAGTACGAGGAAGTTGACCCACCCCGTGTTCATGCTTTCTGCAGTATCACTGATAACACATACAATAAAAAAGAGGTTGTAAAGATGGAAGCTGACATACTTAAGTCTCTGAAGTTTGAGATGGGAAATCCAACTGTAAATACCTTTCTAAGGAGGTTTGCTGATGTTGCTTCTGATAACCAAAAGGCTCCAAATTTACTGTTTGAATTTCTGAGCTGCTATCTTGCTGAGCTAAGTTTGTTGGACTATGATTGCTTGAGAATTTTGCCTTCTATTGTGGCAGCATCTGCTGTATTTCTTGCCAGATTTATTATCTCTCCTGAAGTTCATCCTTGGACTTCTTCTTTGTGTGGGTACTCTGGTTACGAAGCAGTTGAGCTGAAAGAATGTGTCATCATCTTGCATGACTTGTATTTGTCAAGAAAGGCAGCATCTTTCAAAGCTATTAGGGAGAAATACAAGCAGCACAAGTTCAAGTTCGCAGCAAACTTGCCTTCTCCTCCACATGTGCCAAGTCATTACTTTGAAACTCAGTGA 1053 0.4245 METRAAAKRKATAAVATVVVVEKPHPKRQRVVLGELSNYPNAVVSETQNQRKEKLQCRKNPNLKKSSPAKSTPLSSQIVQPYVSDIYQYLHAMEMQRKRRPMVDYIEKVQREVTVIMRTILVDWLVEVAEEYKLQSDTLHLSVSYIDRFLSVNPVSKSRLQLLGISSMLIAAKYEEVDPPRVHAFCSITDNTYNKKEVVKMEADILKSLKFEMGNPTVNTFLRRFADVASDNQKAPNLLFEFLSCYLAELSLLDYDCLRILPSIVAASAVFLARFIISPEVHPWTSSLCGYSGYEAVELKECVIILHDLYLSRKAASFKAIREKYKQHKFKFAANLPSPPHVPSHYFETQ* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01515 350 PIRSF Cyclin_A_B_D_E 2 349 IPR046965 GO:0016538|GO:0044772
Phac9g01515 350 FunFam G2/mitotic-specific cyclin 101 212 - -
Phac9g01515 350 PANTHER CYCLINS 59 327 IPR039361 -
Phac9g01515 350 CDD CYCLIN_AtCycA-like_rpt2 216 330 - -
Phac9g01515 350 SMART Cyclin_C_2 216 339 IPR004367 -
Phac9g01515 350 SMART cyclin_7 220 308 IPR013763 -
Phac9g01515 350 SMART cyclin_7 123 207 IPR013763 -
Phac9g01515 350 Pfam Cyclin, N-terminal domain 85 213 IPR006671 -
Phac9g01515 350 SUPERFAMILY Cyclin-like 216 341 IPR036915 -
Phac9g01515 350 Gene3D - 85 334 - -
Phac9g01515 350 ProSitePatterns Cyclins signature. 118 149 IPR006671 -
Phac9g01515 350 FunFam Cyclin superfamily protein, putative 213 285 - -
Phac9g01515 350 MobiDBLite consensus disorder prediction 45 74 - -
Phac9g01515 350 Pfam Cyclin, C-terminal domain 216 338 IPR004367 -
Phac9g01515 350 SUPERFAMILY Cyclin-like 77 213 IPR036915 -
Phac9g01515 350 Gene3D - 99 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01515 Phac-Chr9 12337549 12340327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01515 3 348 Core Cell Cycle Gene Families AT1G47210 53.039 1.00e-132 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01515 K06627 - gmx:100787417 526.939