Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01483 ATGGATATGGTCAACATTGAGTTGAATAGGTGCACGTGTCCCTCAAGAGGAGACCGTCACCCATATATTTGGCACCCCGTTCCTTCTTTTTTCCTTTTCTTTTTCTTCTCAAACTCTTCTTCTTCTTCTTCTTCTTATCATTCACATTCTCACCGTGCAGGGAGGGCCATGTTAACCACCGTCAACAACGACCACTCCTTCTCCGCTTTCAGCGACTGCAACAGCGACAGATCCGCCGAATTCTCCACACCGTCTTCCGAGACTCGCCGCCTCCTCATCGCCTGCTCCGCCGACAATTCCGACGAATTCATTCGTCACCTCCTTCACAACCTCCATTCCTGTTCCATCGAAGAGCAGAAACAAGCCACCATGGAAATCAGGCTACTCGCCAAGAACAAGCAAGAGAACCGCGTCAAGATCGCAAAAGCCGGCGCCATTCAACCCTTGGTTTCACTTCTATCGTCCTCGCCAGACCTTCAGCTGCAGGAGTACGTGGTGACCGCGATTCTCAATCTCTCGCTCTGCGACGAGAACAAAGAGCTGATCAATTCCTCAGGAGCGGTGAAGCCTCTTGTGGGAGTGCTGGAGACGGGGACGCCGACGGCGAAGGAGAACGCGGCGTGCGCACTGCTCCGGCTCTCGCAGAGAGAGGAGGACAAGGTTGCGATAGGGAGGGCGGGGGCAATTCCGCCTCTGGTGAAGCTTCTAGAAGGTGGGGGGTTGCGCGGGAAGAAGGACGCGGCGACGGCGCTCTACGCGGTGTGTTCGGCGAAGGAGAACAAGGTGAGGGCGGTGAGGGCGGGGGTTATGAGGGCGCTGGTGGAGCTGATGGCGGACTTGGGGTCGAGCATGGTGGACAAGGCGGTGTACGTGGTGAGCGTGGTGGTTGGGGTGGCGGAGGGGAGGGTGGCGCTGGTTGATGAAGGGGGGATTCCGGTGCTGGTGGAGATAGTGGAGGTGGGGACGCAGAGGCAGAAGGAGATCGCGGTTGGGGTTCTATTGCAGATTTGCGAGGAGAGTTGGGTGTACCGTACTATGGTGTCCCGCGAAGGAGCCATTCCACCCCTCGTTGCTTTCTCACAATCACACTCACACTCCCACTCCAATCGCCCCAGACACAAGGCCCAGAAACTAATAGAGCTTTTACGACAACCAAGATCCGGCGATGGCGCTGCTCGTACCTAG 1185 0.5679 MDMVNIELNRCTCPSRGDRHPYIWHPVPSFFLFFFFSNSSSSSSSYHSHSHRAGRAMLTTVNNDHSFSAFSDCNSDRSAEFSTPSSETRRLLIACSADNSDEFIRHLLHNLHSCSIEEQKQATMEIRLLAKNKQENRVKIAKAGAIQPLVSLLSSSPDLQLQEYVVTAILNLSLCDENKELINSSGAVKPLVGVLETGTPTAKENAACALLRLSQREEDKVAIGRAGAIPPLVKLLEGGGLRGKKDAATALYAVCSAKENKVRAVRAGVMRALVELMADLGSSMVDKAVYVVSVVVGVAEGRVALVDEGGIPVLVEIVEVGTQRQKEIAVGVLLQICEESWVYRTMVSREGAIPPLVAFSQSHSHSHSNRPRHKAQKLIELLRQPRSGDGAART* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01483 394 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 144 187 IPR000225 GO:0005515
Phac9g01483 394 SMART arm_5 133 174 IPR000225 GO:0005515
Phac9g01483 394 SMART arm_5 298 338 IPR000225 GO:0005515
Phac9g01483 394 SMART arm_5 257 297 IPR000225 GO:0005515
Phac9g01483 394 SMART arm_5 216 256 IPR000225 GO:0005515
Phac9g01483 394 SMART arm_5 175 215 IPR000225 GO:0005515
Phac9g01483 394 Pfam Armadillo/beta-catenin-like repeat 218 251 IPR000225 GO:0005515
Phac9g01483 394 Pfam Armadillo/beta-catenin-like repeat 176 214 IPR000225 GO:0005515
Phac9g01483 394 Pfam Armadillo/beta-catenin-like repeat 134 173 IPR000225 GO:0005515
Phac9g01483 394 Gene3D - 71 240 IPR011989 -
Phac9g01483 394 Gene3D - 242 385 IPR011989 -
Phac9g01483 394 PANTHER U BOX DOMAIN-CONTAINING 103 383 - -
Phac9g01483 394 SUPERFAMILY ARM repeat 100 365 IPR016024 -
Phac9g01483 394 FunFam RING-type E3 ubiquitin transferase 93 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01483 Phac-Chr9 12131305 12133639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01483 82 389 U-box Gene Family AT2G23140 48.377 1.97e-80 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01483 - - gmx:100782449 447.203