Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01478 ATGGATGATCTTTCGTCCAGCCTTCTATGCCAAGAAAGCGATGCGTATTTGGAAGAAGGAGGTGATGAATTAGAATACCAATTGGTTGGATCACGGCACGATTGTGGGGTTTCGGAGGATGAGTATGTGGGGATTTTGGTTGAGAGAGAGATCGTTCTTGGGTTCAGAACGGACGAGACTTTGGTGTTTGGGGACTGGATGAAGCGTGCACGCATGGAAGCAATCAATTGGATTCTCAAAACAAGAGCAACATTGGGTTTTTGCTTCGAAACGGCTTATTTGTCAGTCACATACTTCGATCGATTTCTTTCTAGACGGTCCATTGATAGTGAAAAGTGTTGGGCAATTCAGTTGCTTTCAATTGCATGTCTCTCTCTGGCTGCAAAGATGGAGGAGTGCAATGTGCCAGCGCTATCAGAGTTCAAATTGGATGACTATTCCTTTGAGGGAAAAGTGATTCAGAAAATGGAGCTCTTGGTGCTCAGCACATTGGAGTGGAAAATGGGTATCATCACTCCCTTTGATTTTCTTTCCTATTTCATCACAAAGTTCTGCAAAGAATCCCCACCAAGTCCTACTTTTCCCAAGACCATGCAACTCATCTTTACCACAATGAAAGAGGTCAATTTAATGGATCAAAAACCATCAGTTATTGCAGCGGCTGCTACATTAGTGGCAATGGATCAAAAATTGACGATGGACGCGGTGGAGTTGAAGATGAGTTCAATTCCACAACATTGGCTTCTAGAACCTAAAGATGTATTCGAGTACTACAATCTAATTCAAAGATTACATGAGGAGGATACCAAAAGAGACACGCACACGCCAATTGACGTGACTGACAGCTCTAGAGTTACTTCTTCCGCAGCAATGGCAAAGAGAAGAAGACTCACATTCAATGATGATGAAGGAAGTAGTCATGGGAAGGGACAGGGCTAG 939 0.4334 MDDLSSSLLCQESDAYLEEGGDELEYQLVGSRHDCGVSEDEYVGILVEREIVLGFRTDETLVFGDWMKRARMEAINWILKTRATLGFCFETAYLSVTYFDRFLSRRSIDSEKCWAIQLLSIACLSLAAKMEECNVPALSEFKLDDYSFEGKVIQKMELLVLSTLEWKMGIITPFDFLSYFITKFCKESPPSPTFPKTMQLIFTTMKEVNLMDQKPSVIAAAATLVAMDQKLTMDAVELKMSSIPQHWLLEPKDVFEYYNLIQRLHEEDTKRDTHTPIDVTDSSRVTSSAAMAKRRRLTFNDDEGSSHGKGQG* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01478 312 CDD CYCLIN_AtCycD-like_rpt1 70 166 - -
Phac9g01478 312 ProSitePatterns Cyclins signature. 71 102 IPR006671 -
Phac9g01478 312 CDD CYCLIN_AtCycD-like_rpt2 171 261 - -
Phac9g01478 312 FunFam Cyclin-D5-1 66 169 - -
Phac9g01478 312 MobiDBLite consensus disorder prediction 269 312 - -
Phac9g01478 312 SUPERFAMILY Cyclin-like 154 243 IPR036915 -
Phac9g01478 312 PANTHER CYCLINS 39 262 IPR039361 -
Phac9g01478 312 SUPERFAMILY Cyclin-like 34 168 IPR036915 -
Phac9g01478 312 Gene3D - 164 277 - -
Phac9g01478 312 SMART cyclin_7 76 162 IPR013763 -
Phac9g01478 312 Pfam Cyclin, N-terminal domain 69 168 IPR006671 -
Phac9g01478 312 SMART Cyclin_C_2 171 290 IPR004367 -
Phac9g01478 312 Gene3D - 64 163 - -
Phac9g01478 312 Pfam Cyclin, C-terminal domain 171 271 IPR004367 -
Phac9g01478 312 FunFam Cyclin-D5-1 170 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01478 Phac-Chr9 12111341 12113967 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01478 8 243 Core Cell Cycle Gene Families AT4G37630 38.956 6.10e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01478 K18811 - gmx:100780266 546.199