Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01462 ATGTTGTGCGCTTGTTCTTCCGGTGAGCAGTTCAAATTTGAAGAGCCGCCGCAGTCGCCGGACTCCCTCGCCACCAGGGATTTCTCCGCTAGCGGTCTCTCTTCCAGGACCACCGGGGAATGGGAACCTAAATTCGATGAAGCGCAAGTAGAACAAGCTGAATCTACACTTAAAGAAGCTCTTTCCTTAAACTATGAGGAGGCTAGGGCTTTGTTGGGGAGACTTGAATACCAAAGAGGGAATTTCGATGCTGCACTTCAAGTGTTTCAGGGTATAGACATCAAGGGTTTGACCCTGAGAATGATCAAGGCTATTGCTGAAAGAACCAAGCAGAGGAAACCACGTTCCAAGGCAGATATCGTTGTTTCAAATGTGATGTCATTGCACTCTGTTAGCCTGCTTCTTGAGGCAATTTTGCTTAAAGCAAGGTCATTGGAGGAGCTTGGGGAATGCATTGAGGCTGCAAAGGAGTGCAGAATAATTCTTGATACAGTTGAATCTGCCCTTCCTAATGGAATACCTGAGGGTATTGGCGAAGATTGTAAGTTGAAAGAGATGTTTCATAAAGCTTTGGAATTACTTCCTAGGCTTTGGATCAAAGCAGGATTTCTGGATGAAGCTGTAGCTGCGTATCGTCGTGCTCTGGTCAAGCCATGGAGTTTGGAGCCACAAAGGTTGGCTGCTGTACAAAAAGATTTAGCTACGACACTACTCTATGGCGGTGTTGAAGTTAGCCTATCCTCTCAGTTGCAGGTGTGGGGTGAGACAACACCTGCCAACAGTGTTGAAGAAGCGATACATTTGCTAGTAATACTCATGAGCAAGGTGGCAATTGGGGAAATAGACTGGGATGCTGAAATAATGGATCATCTTACGTTTGCACTTTCAGTCACTGGGATGTTTGAGCTACTTGCAGATCATGTAGAGCAGATCCTTCCAGGTATCTATAGTCGGGCTGAGAGGTGGTACTTTCTTGCTCTGTGTTTTAGTGCAGCAGGACATGATGAGGTGGCATTGAACCTTTTAAGGAAGGCTTGCGGGAGTTCTGAAGCTAACCATAAACCCCATTTTCCTTCATTTTTGCTTGGAGCAAAACTCTGTTCCCTAGATCCTCGCCATGCTCATGAAGGCATTAACTTTTCACGTAAAGTTATTGAGCTAGCTAAGCATCAAAATGAGCATTTTCTGAGTCAAGGCCATACATTTCTTGGAATCTGCTATGGTGCTGCAGCCAGAATTTCTGTACTGGATTCTGAAAGAAGTATATTTGAAAGAGAGTCTTTGGACTCTCTAAACTGTGCTGCTGTAAATGGAAATGATGACCTGGAAGCAATATTCAGCCTTGGACTGGAAAATGCAATTCAAAGGAATCTGGATGCAGCTTACAACAACATAATGATGTTCTCAGACATGACTGTTGGCAGTTCGAGAGGTTGGCAGCTGTTAGCACTTATAGTATCTGGACAGCATCGGTTTAAGGATGCAGAAACTATAGTTGATTTTGCTTTAGATGAGGCCGGGGGGATGGATCAACTTGATCTTCTGAGATTGAAAGCTATACTTCAAATTGCTCAACAGCAACCCAGGCAAGCAATAGAAACATATAGGATCTTGCTTGCACTAATTCAAGCAAAAAAGGAGCTTTGGCTTCAAGATAACAACATTAATCGAGAACAAGCATGCAGGCAAGAGGCATTAACAGAAAGGAAGTTGGAAATGGAAGCCTGGCAGGATTTGGCTACAATTTATACAGATATCGGTTCCTTGATCGATGCAAAAACTTGTGTTGACAAGGCCCAATTGATAGAGTTTTTTTCTCCAAGAAGTTGGCATATTACAGGGTTGATGCTTGAAGCTCAATCATTATACCGAGAGGCATTTATTTCCTTTTCAATATCATTGTCAGTAGAACCAGATTACGTTCCCAGTATCATTTCTACTGCAGAATTGTTGACGAAACTTGGTATGCAATCACTTCCAATTGCAAGAAGTTTTTTAATGAATGCTTTACGATTAGAACCTACAAACCACGATGCTTGGTTCAACCTTGGATTGGTTTCAAAAATGGAAGGTTCATTACAGCAAGCAGCAGAGTTCTTTCAAGCTGCTTATGAGCTGAAGCTTTCTGCTCCAGTGCAAAAATTTAAGTAA 2151 0.4286 MLCACSSGEQFKFEEPPQSPDSLATRDFSASGLSSRTTGEWEPKFDEAQVEQAESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIKGLTLRMIKAIAERTKQRKPRSKADIVVSNVMSLHSVSLLLEAILLKARSLEELGECIEAAKECRIILDTVESALPNGIPEGIGEDCKLKEMFHKALELLPRLWIKAGFLDEAVAAYRRALVKPWSLEPQRLAAVQKDLATTLLYGGVEVSLSSQLQVWGETTPANSVEEAIHLLVILMSKVAIGEIDWDAEIMDHLTFALSVTGMFELLADHVEQILPGIYSRAERWYFLALCFSAAGHDEVALNLLRKACGSSEANHKPHFPSFLLGAKLCSLDPRHAHEGINFSRKVIELAKHQNEHFLSQGHTFLGICYGAAARISVLDSERSIFERESLDSLNCAAVNGNDDLEAIFSLGLENAIQRNLDAAYNNIMMFSDMTVGSSRGWQLLALIVSGQHRFKDAETIVDFALDEAGGMDQLDLLRLKAILQIAQQQPRQAIETYRILLALIQAKKELWLQDNNINREQACRQEALTERKLEMEAWQDLATIYTDIGSLIDAKTCVDKAQLIEFFSPRSWHITGLMLEAQSLYREAFISFSISLSVEPDYVPSIISTAELLTKLGMQSLPIARSFLMNALRLEPTNHDAWFNLGLVSKMEGSLQQAAEFFQAAYELKLSAPVQKFK* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01462 716 SUPERFAMILY TPR-like 50 391 IPR011990 GO:0005515
Phac9g01462 716 PANTHER PROTEIN NPG1 1 716 IPR043376 -
Phac9g01462 716 SUPERFAMILY TPR-like 562 707 IPR011990 GO:0005515
Phac9g01462 716 Gene3D Tetratricopeptide repeat domain 545 711 IPR011990 GO:0005515
Phac9g01462 716 SMART tpr_5 476 509 IPR019734 GO:0005515
Phac9g01462 716 SMART tpr_5 319 352 IPR019734 GO:0005515
Phac9g01462 716 SMART tpr_5 677 710 IPR019734 GO:0005515
Phac9g01462 716 SMART tpr_5 512 545 IPR019734 GO:0005515
Phac9g01462 716 SMART tpr_5 607 640 IPR019734 GO:0005515
Phac9g01462 716 MobiDBLite consensus disorder prediction 1 43 - -
Phac9g01462 716 Gene3D Tetratricopeptide repeat domain 44 241 IPR011990 GO:0005515
Phac9g01462 716 Gene3D Tetratricopeptide repeat domain 259 544 IPR011990 GO:0005515
Phac9g01462 716 MobiDBLite consensus disorder prediction 22 38 - -
Phac9g01462 716 Pfam Tetratricopeptide repeat 48 90 - -
Phac9g01462 716 ProSiteProfiles TPR repeat profile. 677 710 IPR019734 GO:0005515
Phac9g01462 716 SUPERFAMILY TPR-like 427 600 IPR011990 GO:0005515
Phac9g01462 716 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01462 Phac-Chr9 12033719 12038002 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01462 1 715 Calmodulin-binding Proteins AT1G27460 59.110 0.0 847