Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01444 ATGGAGGACGCATTTGCCAGATCTATTCCCGAGGTCCTCGATTTCTTCGGAGTGGACCCGACTAAGGGTTTATCTGATGCTGAGGTGGTACACCATGCTAGACTTTATGGGAATAACGGTATGCCTTCTGTACGGCCGTGTATATTTAACTCTGTTTCTTACGTGGACAAGAGAAATTTACCTATTGCATCTTTGTCACCAGTTTTGTTCAAGAATCTTCTTTGTTTGCCTATTAATATTTCTTTTCTTTTTCCCTTACTGCATGGTGACGGCTACACAGTGCTTCCTGAAGATCAAAGAGCTCCGTTTTGGAAATTGGTTTTGAAGCAATTTGATGATTTGCTTGTAAAGATACTAATTGCAGCTGCTCTTATATCTTTTGTTCTGGCTTTAGTTAATGGAGAAACAGGCTTGATGGCATTTCTGGAGCCTTCCGTTATTCTGATGATATTGGCAGCAAATGCAGCAGTAGGAGTGATTACAGAATCAAACGCTGAAAAAGCTCTGGAGGAGCTGCGTGCCTATCAAGCTGATGTGGCAACTGTCTTGCGTAATGGTTGTTTTTCCATACTTCCTGCAAATGAACTTGTTCCTGGGGATATTGTGGAGGTTTCTGTGGGCTGCAAAATTCCTGCTGATATGAGGATGATTGAGATGCTGAGCAATCAAGTGCGTGTTGATCAAGCTATTCTTACAGGTGAGAGCAGCTCCGTGGAGAAAGAGCTGAAAACAACCACAACATCAAATGCTGTATACCAAGACAAAACAAATATTCTGTTCTCGGGTACGGTAATGGTTGCTGGTAGGGCAAGAGCTGTTGTGGTGGGAGTTGGTCCTAACACGGCTATGGGCAGCATACGAGATTCAATGTTGCGGACCGAGGATGAGGCAACACCATTGAAAAAGAAGCTGGACGAGTTTGGTACCTTTTTGGCCAAGGTTATAGCAGGGATTTGTGTTTTGGTGTGGATTGTAAATATTGGTCACTTTCGTGACCCTTCTCATGGTGGTTTCTTGAGAGGTGCAATCCATTATTTTAAGATTGCAGTTGCTCTGGCAGTTGCAGCAATTCCAGAAGGTCTCCCTGCAGTTGTGACAACGTGTTTGGCTCTTGGAACAAAGCGTATGGCTAGGTTGAATGCCATTGTTCGCTCCCTGCCATCGGTCGAGACATTGGGCTGCACAACTGTTATTTGCAGTGACAAAACTGGGACCCTAACTACTAATATGATGTCAGTTGCGAAGGTATGTGTTGTTGAATCTGCAAATCGTGGCCCTGTTGTTTCTGAATACAGTGTCAGCGGAACAACATATGCACCTGAAGGCATAATATTTGACAGTACAGGGATGCAGCTTGACTTTCCTGCTGAATTGCCTTGTCTTCTTCACATGGCAATGTGTTCTGCTCTTTGCAATGAATCAACCCTGCAGTATAATCCTGATAAAGGGAATTATGAAAAAATTGGTGAGTCAACTGAAGTGGCACTACGTGTCTTGGCAGAAAAGGTTGGTCTCCCTGGTTTCAATTCTATGCCATCAGCCTTGAATATGCTGACTAAGCATGAACGTGCTTCTTACTGTAACCATTATTGGGAGGAACAATTCAGAAAGATACATGCTTTGGAGTTTTCTCGAGATCGGAAAATGATGAGTGTGCTTTGCAGCCGGAACCAGATGCATATTTTGTTCTCGAAAGGTGCCCCAGAAAGTATAATACCTAGATGTGCTACCATTCTGTGCAACGATGATGGTTCCATTGTGCCACTCACTGCTGATATTCGAGCAGAGCTGGACTCAAGGTTCCACAGTTTTGCAGGAAAAGAAACATTAAGATGCCTTGCTTTGGCCCTGAAATGGATGCCCTCAGTTCAACAGTCATTGTCCTTCGATGATGAGAAAGATCTTACATTTATTGGGTTGGTTGGGATGCTGGATCCTCCACGAGATGAAGTAAGAAATGCAATGCTTTCATGTATGACTGCTGGCATACGTGTTATAGTTGTCACTGGGGATAACAAGTCCACTGCTGAGTCACTTTGCCGCAAGATAGGTGCTTTTGATCAATTGATAGATTTTGCTGAGCATTCTTACACTGCTTCTGAGTTTGAAGAACTTCCAGCACTACAACAAACTATAGCATTGCAACGTATGGCACTTTTTACTAGGGTTGAGCCTTCTCATAAAAGGATCCTGGTTGAAGCATTACAGCACCAGAATGAAGTGGTTGCAATGACGGGTGATGGAGTTAATGATGCACCTGCACTGAAGAAGGCGGATATAGGAATTGCTATGGGTTCAGGAACAGCTGTTGCTAAGAGTGCTTCAGACATGGTGCTGGCTGATGACAACTTTGCCTCTATTGTTGCAGCTGTGGCAGAGGGAAGGGCTATATACAATAATACAAAACAGTTTATTCGATACATGATTTCTTCCAATATTGGCGAAGTAGTTTGTATATTTGTGGCTGCAGTGCTTGGAATACCGGATACCCTTGCCCCTGTCCAGTTGCTTTGGGTCAATTTGGTTACTGACGGATTGCCTGCCACTGCTATTGGCTTCAATAAACAAGACTCTGATGTGATGAGGGCTAAGCCTAGAAAGGTGAATGAAGCCGTTGTTAGTGGTTGGCTCTTCTTTCGCTATTTGGTAATAGGAGCTTATGTTGGCCTTGCTACTGTTGCTGGCTTTATTTGGTGGTTTGTTTATTCTGATGGTGGCCCTAAACTTCCATACACCGAACTGATGAATTTTGATACCTGCGCAACCAGGGAGACAACTTATCCATGTAGTATATTTGATGATCGACATCCATCTACTGTATCAATGACTGTGCTTGTCGTAGTTGAGATGTTCAACGCTTTGAACAATCTTAGTGAAAATCAATCTCTTCTGGTTATCCCTCCATGGAGTAACATGTGGCTTGTTGTTTCTATAATCATCACTATGCTTCTTCACATACTAATCTTATATGTTCACCCACTATCGGTTCTTTTCTCCGTAACACCGTTATCTTGGGCTGATTGGATAGTTGTCCTCTATCTTTCATTACCTGTTATAGTCATTGATGAGGTGTTGAAGTTCTTCTCCAGAAATCCCATAGGTTTGAGATCCAGATTATGGTTCAGGAGGTCTGATTTACTTCCAAAAAAAGATTTACATGAAAAGTAA 3168 0.429 MEDAFARSIPEVLDFFGVDPTKGLSDAEVVHHARLYGNNGMPSVRPCIFNSVSYVDKRNLPIASLSPVLFKNLLCLPINISFLFPLLHGDGYTVLPEDQRAPFWKLVLKQFDDLLVKILIAAALISFVLALVNGETGLMAFLEPSVILMILAANAAVGVITESNAEKALEELRAYQADVATVLRNGCFSILPANELVPGDIVEVSVGCKIPADMRMIEMLSNQVRVDQAILTGESSSVEKELKTTTTSNAVYQDKTNILFSGTVMVAGRARAVVVGVGPNTAMGSIRDSMLRTEDEATPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKVCVVESANRGPVVSEYSVSGTTYAPEGIIFDSTGMQLDFPAELPCLLHMAMCSALCNESTLQYNPDKGNYEKIGESTEVALRVLAEKVGLPGFNSMPSALNMLTKHERASYCNHYWEEQFRKIHALEFSRDRKMMSVLCSRNQMHILFSKGAPESIIPRCATILCNDDGSIVPLTADIRAELDSRFHSFAGKETLRCLALALKWMPSVQQSLSFDDEKDLTFIGLVGMLDPPRDEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDQLIDFAEHSYTASEFEELPALQQTIALQRMALFTRVEPSHKRILVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMRAKPRKVNEAVVSGWLFFRYLVIGAYVGLATVAGFIWWFVYSDGGPKLPYTELMNFDTCATRETTYPCSIFDDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNMWLVVSIIITMLLHILILYVHPLSVLFSVTPLSWADWIVVLYLSLPVIVIDEVLKFFSRNPIGLRSRLWFRRSDLLPKKDLHEK* 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01444 1055 PRINTS P-type cation-transporting ATPase superfamily signature 227 241 - -
Phac9g01444 1055 PRINTS P-type cation-transporting ATPase superfamily signature 639 650 - -
Phac9g01444 1055 PRINTS P-type cation-transporting ATPase superfamily signature 661 671 - -
Phac9g01444 1055 PRINTS P-type cation-transporting ATPase superfamily signature 768 780 - -
Phac9g01444 1055 PRINTS P-type cation-transporting ATPase superfamily signature 399 413 - -
Phac9g01444 1055 PRINTS P-type cation-transporting ATPase superfamily signature 745 764 - -
Phac9g01444 1055 SFLD C1.7: P-type atpase like 380 797 - -
Phac9g01444 1055 ProSitePatterns E1-E2 ATPases phosphorylation site. 401 407 IPR018303 -
Phac9g01444 1055 Pfam Cation transport ATPase (P-type) 469 578 - -
Phac9g01444 1055 SUPERFAMILY Calcium ATPase, transduction domain A 178 289 IPR008250 -
Phac9g01444 1055 FunFam Calcium-transporting ATPase, putative 268 395 - -
Phac9g01444 1055 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 741 1034 - -
Phac9g01444 1055 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 1030 IPR023298 -
Phac9g01444 1055 NCBIfam calcium-translocating P-type ATPase, SERCA-type 107 900 IPR005782 GO:0005388|GO:0006816|GO:0016020
Phac9g01444 1055 Gene3D - 396 789 IPR023214 -
Phac9g01444 1055 Pfam Cation transporting ATPase, C-terminus 829 1028 IPR006068 -
Phac9g01444 1055 Coils Coil 165 185 - -
Phac9g01444 1055 Pfam E1-E2 ATPase 176 378 - -
Phac9g01444 1055 NCBIfam HAD-IC family P-type ATPase 715 830 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g01444 1055 NCBIfam HAD-IC family P-type ATPase 146 423 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g01444 1055 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 406 643 IPR023299 GO:0000166
Phac9g01444 1055 PANTHER CALCIUM-TRANSPORTING ATPASE 91 1033 - -
Phac9g01444 1055 SMART Cation_ATPase_N_a_2 3 131 IPR004014 -
Phac9g01444 1055 FunFam Calcium-transporting ATPase 409 646 - -
Phac9g01444 1055 FunFam Calcium-transporting ATPase 166 291 - -
Phac9g01444 1055 Pfam Cation transporter/ATPase, N-terminus 95 126 IPR004014 -
Phac9g01444 1055 Pfam haloacid dehalogenase-like hydrolase 637 759 - -
Phac9g01444 1055 SUPERFAMILY HAD-like 632 793 IPR036412 -
Phac9g01444 1055 SFLD p-type atpase 380 797 IPR044492 -
Phac9g01444 1055 FunFam Sodium/potassium-transporting ATPase subunit alpha 638 784 - -
Phac9g01444 1055 Gene3D - 409 646 IPR023299 GO:0000166
Phac9g01444 1055 Gene3D - 89 291 - -
Phac9g01444 1055 CDD P-type_ATPase_SERCA 5 1030 - -
Phac9g01444 1055 PRINTS H+-transporting ATPase (proton pump) signature 745 761 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g01444 1055 PRINTS H+-transporting ATPase (proton pump) signature 776 801 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g01444 1055 PRINTS H+-transporting ATPase (proton pump) signature 717 733 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac9g01444 1055 Gene3D - 109 1030 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01444 Phac-Chr9 11923256 11955632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01444 91 1049 Primary Pumps ATPases(2) AT1G10130 84.463 0.0 1670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01444 K05853 - gmx:100783509 1813.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01444 9 11923256 11955632 Phac9g01444 9 11923256 11955632 ECH