Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01379 ATGGACTTTGTCTCCGAACGTGATTTCCCAAATCTTGAGATCATTCCTCATACCTTCAACTCATGCTTTTTCTCTGCTCAGCTATACCCCACGGACAAAACCATGGAGGTTTCACTTTCACCACTAGAGGGTTTTTCCGATCACGATTGGACACAGCAGTTGCCATATTCAAGCAAGCAACTTTGCTTGAATGAGTTCCCAGATTTGGAAAACCTGGACATCGATTTTAGCCTCCCACCCCTGGGTGAAGATTTGGAGGAGGTGGACCAGAAGCCCTTGAACATTATTGTTGTTCCCGAAGACGGTCTTTGCAGTCGCGAGAAGGGTTTTGGGGATGCTTTATTGGCGATTGAAAGTGGGTCTGCCATTTGTGTGAAGAAAGAGGAGGTGCAGAATATTGAGCAGATGCTAGTGCCCAGAGCTAGTGGTAGTAGTAGTAGCAGTAAGAAGAAGAAGCCATGTGCTTTGGAGTTTGAGGACATAAAGAAGCATTTTGATGTTCCCATTAATGAAGCTGCGAAGCAAATGAATGTGGGGTTAACCATGTTGAAAAGAAGGTGCAGGGAGCTTAACATCATGAGGTGGCCCCATAGGAAACTCAAGAGCTTGCAATTACTCATCGACAATGTTAAGGAATTGGGTTTGACAGAGGAGGTGTCCATGTTGGAGAAGCATAAAAGGTTGTTGGAGAAATTACCAGGACTGGAAATAAGTGCAAAAGCCAAGAAGCTGAGGCAAGCTTGTTTCAAAGCTAATTACAAGAGGAGAAGGTATATGGGTATGGCAGTCCAAGCTTGA 798 0.4474 MDFVSERDFPNLEIIPHTFNSCFFSAQLYPTDKTMEVSLSPLEGFSDHDWTQQLPYSSKQLCLNEFPDLENLDIDFSLPPLGEDLEEVDQKPLNIIVVPEDGLCSREKGFGDALLAIESGSAICVKKEEVQNIEQMLVPRASGSSSSSKKKKPCALEFEDIKKHFDVPINEAAKQMNVGLTMLKRRCRELNIMRWPHRKLKSLQLLIDNVKELGLTEEVSMLEKHKRLLEKLPGLEISAKAKKLRQACFKANYKRRRYMGMAVQA* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01379 265 PANTHER PROTEIN RKD4 145 261 IPR044607 GO:0003700
Phac9g01379 265 Pfam RWP-RK domain 156 203 IPR003035 -
Phac9g01379 265 ProSiteProfiles RWP-RK domain profile. 140 225 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01379 Phac-Chr9 11082948 11084850 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01379 156 260 AtRKD Transcription Factor Family AT5G53040 62.857 3.28e-40 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Phac9g01379 RWP-RK 5.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01379 - - pvu:PHAVU_009G051600g 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01379 9 11082948 11084850 Phac9g01379 9 11082948 11084850 ECH