Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01368 ATGGCCCTGTCAACTCCACACATGCAAAGATTCCTCTTATGCAAGCTCCATACTCGCTCCACCTCTAAGACCACACACAAAAACACCTTCACCACCACCACCAGGGGCCGGTGTTGCTCTGCCATAGCCATCGATGCTCCATCGTCTTTGACTGAGGTGCCCGGTGTGAGATGGGGGTCCATAGCCTTGCAGGGTCTTCGTGAAGAGATGGAGGATGACATCATTGTTCGACCCGATGGCCTTCAGGGCTTCTCTTTCGCGGCTGTCTTCGATGGCCATGGAGGGTTTTCTTCTGTCGAGTTCCTCAGTGCTAACTACAGGGATGAGCTGTACAAGGAGTGTGTTGAAGCTTTACAAGGTGGATTACTATTAGTGCAGAAAGATTTCAAAGCCGCTAAAGGAGCATTGCAGGAGGCATTTCTCAAGGCAGACACGAGGTTACTAAAACGGCTTGAAATGAATGGAGAGGAGGATGAATCAGGTGCTACAGCAACTGCCGTTTTCATTGGAGATGATGAGCTTCTAATTTCACACATCGGTGACTCCTCTGCGGTTCTATGCAGATCTGGAAAAGCAGAAGTTCTCACTAGTCCTCACCGTCCATATGGGAGCAACAAAACTTCTCTTGATGAAATTAGAAGAATCAGAGAAGCAGGTGGATGGATTAGCAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTTGGGGACATGCGATTCAAAACGAAGAAGAACGAGATGCTGCAAAAAGGAGTTCAGGAAGGAAAATGGTCAGCAAAGTTCATCTCTCGTGTACAGCTCAACAATGACTTGGTTGTAGCATACCCTGATATTTATCAGGTAGCTCTTGGCTCTGATGCAGAATTTATAGTATTAGCAACCGATGGCTTATGGGATTACATCAGCAGCTCAGAAGCAGTTTCTTTAGTTAGGGATCAACTACGAAAACATGGAAACATTCAGCTAGCATGTGAATCGCTTGCAGAAGCCGCTTTGGACCGACGTTCACAGGATAATGTCAGCATTATAATTGCCGATTTAGGGCGGACAGACTGGCTGAATGTGCCACTGGAGCAACAAAATTCTATAGTTGAGCTGGTTCAAGCTCTTGCTACCATTGGAATTGTGTCTTTTGGAATCTGGTTTTCATCACAGCTTTCTTTATAG 1173 0.4612 MALSTPHMQRFLLCKLHTRSTSKTTHKNTFTTTTRGRCCSAIAIDAPSSLTEVPGVRWGSIALQGLREEMEDDIIVRPDGLQGFSFAAVFDGHGGFSSVEFLSANYRDELYKECVEALQGGLLLVQKDFKAAKGALQEAFLKADTRLLKRLEMNGEEDESGATATAVFIGDDELLISHIGDSSAVLCRSGKAEVLTSPHRPYGSNKTSLDEIRRIREAGGWISNGRICGDIAVSRAFGDMRFKTKKNEMLQKGVQEGKWSAKFISRVQLNNDLVVAYPDIYQVALGSDAEFIVLATDGLWDYISSSEAVSLVRDQLRKHGNIQLACESLAEAALDRRSQDNVSIIIADLGRTDWLNVPLEQQNSIVELVQALATIGIVSFGIWFSSQLSL* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01368 390 ProSiteProfiles PPM-type phosphatase domain profile. 57 349 IPR001932 -
Phac9g01368 390 SMART PP2C_4 47 347 IPR001932 -
Phac9g01368 390 Gene3D - 56 354 IPR036457 -
Phac9g01368 390 FunFam Protein phosphatase 2C 57 56 356 - -
Phac9g01368 390 Pfam Protein phosphatase 2C 59 342 IPR001932 -
Phac9g01368 390 CDD PP2Cc 64 349 IPR001932 -
Phac9g01368 390 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Phac9g01368 390 PANTHER PROTEIN PHOSPHATASE 2C 35 347 IPR015655 GO:0004722|GO:0006470
Phac9g01368 390 SUPERFAMILY PP2C-like 49 350 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01368 Phac-Chr9 10996892 11001251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01368 1 326 PP2C-type Phosphatase Gene Family AT4G27800 61.094 1.03e-138 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01368 K04457 - vra:106776113 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01368 9 10996892 11001251 Phac9g01368 9 10996892 11001251 ECH