Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01334 ATGGAGGGAGATGAGAATATTCAAGCATCAAAGGGAAAAAATGTTGAAAGTTTCGCCTGCTTGGAGGCACCAAGGAAGAAAAACAAGAAGATAGAAAACAAGAGGAGGTTTAGTGATGAGCAGATAAGATCACTAGAATGCATATTTGAGACAGAGTCGAAGCTTGAGCCAAGGAAGAAGATGCAACTGGCAAGAGATCTTGGCCTGCAGCCTCGCCAAGTTGCCATATGGTTCCAAAACAGAAGGGCAAGGTGGAAATCAAAACGCATAGAGCAAGAATACAGGAAACTCAAGGATGAATATGACAATTTAGCGTCTAGGTTTGAGTCCCTAAAGAAAGAGAAGGAGTCTTTGCAAGTAGAGTTGCAGAAGCTAAGTGATTTGGTGGAATCATCTCATGATGGTGGAAGGGAAGACAAGGGTGCCAAAGAACACAGCATAGAGGATGGTGGTTCAGGCAGTGGATACAGCAGTTGGAAGCCTGAAGCAAAACCAAGGTTTTCAACTGAGGGTTTGGAAGAGAGAGTAGGTGTGTATTCAGATGATCAAAATGAGAATAGCATCATAAGGAGTGAGAAATATGAGGACAAAGGACACCAACTTCTCAGAGTGGATGATAATGATCAGGCTGAGATACCATTAGCATCACTAGAAAAATGGTACAGTAGTGTGGACCCTAATGGCATCTTGGACCAGTCATGTAGCAGCTCTCAATGGTTAGATTTCTGGACATGA 735 0.4299 MEGDENIQASKGKNVESFACLEAPRKKNKKIENKRRFSDEQIRSLECIFETESKLEPRKKMQLARDLGLQPRQVAIWFQNRRARWKSKRIEQEYRKLKDEYDNLASRFESLKKEKESLQVELQKLSDLVESSHDGGREDKGAKEHSIEDGGSGSGYSSWKPEAKPRFSTEGLEERVGVYSDDQNENSIIRSEKYEDKGHQLLRVDDNDQAEIPLASLEKWYSSVDPNGILDQSCSSSQWLDFWT* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01334 244 Pfam Homeobox associated leucine zipper 88 129 IPR003106 GO:0006355|GO:0043565
Phac9g01334 244 MobiDBLite consensus disorder prediction 126 189 - -
Phac9g01334 244 FunFam Homeobox-leucine zipper protein ATHB-7 15 88 - -
Phac9g01334 244 MobiDBLite consensus disorder prediction 126 147 - -
Phac9g01334 244 PRINTS Lambda-repressor HTH signature 68 84 IPR000047 GO:0003677
Phac9g01334 244 PRINTS Lambda-repressor HTH signature 59 68 IPR000047 GO:0003677
Phac9g01334 244 Gene3D - 23 97 - -
Phac9g01334 244 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 26 180 IPR045224 GO:0003700
Phac9g01334 244 CDD homeodomain 34 89 IPR001356 GO:0003677
Phac9g01334 244 ProSiteProfiles 'Homeobox' domain profile. 28 88 IPR001356 GO:0003677
Phac9g01334 244 SUPERFAMILY Homeodomain-like 24 88 IPR009057 -
Phac9g01334 244 Coils Coil 80 128 - -
Phac9g01334 244 ProSitePatterns 'Homeobox' domain signature. 63 86 IPR017970 GO:0000981|GO:0006355
Phac9g01334 244 SMART HOX_1 31 92 IPR001356 GO:0003677
Phac9g01334 244 Pfam Homeodomain 34 86 IPR001356 GO:0003677
Phac9g01334 244 MobiDBLite consensus disorder prediction 166 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01334 Phac-Chr9 10556168 10558068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01334 15 244 Homeobox Transcription Factor Family AT2G46680 40.408 3.01e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac9g01334 Homeodomain 4.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01334 K09338 - gmx:100793260 424.091