Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01323 ATGGGTGAGTTTGGTGTTTCCCACACGAGAAAAAGAAGCAGCAGCAACAACAGTGGTGGTAGCGTTGTTGGGTTGGATGTGAAACTGCAGAGCCCTGAAGCATTATTCCATAATAAGATGACGATGATGGCTCATCATAATCATCACCACCGTCCATTGTCATCACCCTTTGATAATGATTCCTGTGCTGGTGATGGCGATGGTCCCACGGCTTACATGTCTTTTACTAATCATATAAACCTTGTTAGTGGAGCTTCTGTTCTCGCTCCTGCTATTGATGGTGGCTGTGGTGCTCCTGCACCTGTAAGGACTTTGCAGCCTTTTGACATTTCTCCTTATACTTCTCCCACCACCACCTCTTCTACCTTCAAACCCTCAGCAGGTGGGATGGCGGCTTCGTTGGGGTTTCCTTTCACAAGTGCACAATGGAGAGAGCTTGAAAGACAAGCCATGATATACAAGTACATGATGGCTTCTGTTCCTGTTCCACCTGATCTCCTCATCCATACTTCACTCACATCCTCTTCTCGCTCTGCCTGCAGTATGAATGACCCTTTGCTTTCTCTGGATGGTGGTTTCAATCTGAGGTTGGCTAGTAGCACTGACCCGGAGCCAGGTAGGTGTAGAAGAACAGATGGCAAAAAATGGAGATGTTCAAGAGATGTGGCTCCAAACCACAAGTACTGCGAGCGCCACATGCATAGAGGGCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTAACACCAAGACCACCACTCCCACTAGCATCAACAACAGCCACCAAATCAAGAGGCCTCGCCATGAGTCTAATCCTTTTCCTTCTATACCTGATGTTACCGTGGCTATTTCTAACCCCACATCTAGAAAACATGGATCTTCACCCCATTTTCTTGGCTCTTCCACCACTCCGCCATACCTTGAATCTCCCCTCTCTCTTGCTAACTTTAGTCTCAAAGCTGCAAATTTTGACTCCATGGCTTCTGTTTCTGCAAATAAGGAGCCCAGGGGTTTGGAGTGGATGCTGAATGGAGATCCTATTTCCCTGGGTGCTTCTGACTCAGAATGGCAGTCTCTGATGCATAACAAAGTTGGACTGAGCAGCGAGAGTTGTTGTAATAACACCCAGCCTCAGTATCTGAATTCATTTGCACTATACAACACTGGACTGGATCAGCAAAACAGACGCCATCCTTTCCTGAATCCTCTGATTGTCCCCATGGAAAATCTCCAACCAGAGAAGACGAGGGGTTTCATTGATGCTTGGTCCAACACAGAAACTGGTGAAAACAATGCCGCCACCACCACCACCACCAACAATAACAACAACAAGAACTCTGCTGTATCAATTGCACCTTGGGTGGCTTCAACGCTTGGGGGTCCTCTAGCTGAAGTTCTTAGGTCAAGCACAGTCACTGCCACCACCAACACCAACGAAGCAACCTCCAACACACCCTCACCAGCCACTACACATGTTGAATCTAACAGTCCTCTGGGAACAATGGTGTCATCTCCATCTGGGGTGTTGCAGAAAACGCTTGTTTCATTGTCCGATAGCAGTAGCAATAGCAGCCCAACGGTTGCATCATCAAGGGCCAATTCTGAGATGACCTTGCTCAGGTTTCAACCAAATGTAAATTAA 1638 0.475 MGEFGVSHTRKRSSSNNSGGSVVGLDVKLQSPEALFHNKMTMMAHHNHHHRPLSSPFDNDSCAGDGDGPTAYMSFTNHINLVSGASVLAPAIDGGCGAPAPVRTLQPFDISPYTSPTTTSSTFKPSAGGMAASLGFPFTSAQWRELERQAMIYKYMMASVPVPPDLLIHTSLTSSSRSACSMNDPLLSLDGGFNLRLASSTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVNTKTTTPTSINNSHQIKRPRHESNPFPSIPDVTVAISNPTSRKHGSSPHFLGSSTTPPYLESPLSLANFSLKAANFDSMASVSANKEPRGLEWMLNGDPISLGASDSEWQSLMHNKVGLSSESCCNNTQPQYLNSFALYNTGLDQQNRRHPFLNPLIVPMENLQPEKTRGFIDAWSNTETGENNAATTTTTNNNNNKNSAVSIAPWVASTLGGPLAEVLRSSTVTATTNTNEATSNTPSPATTHVESNSPLGTMVSSPSGVLQKTLVSLSDSSSNSSPTVASSRANSEMTLLRFQPNVN* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01323 545 ProSiteProfiles WRC domain profile. 202 246 IPR014977 -
Phac9g01323 545 Pfam QLQ 137 167 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac9g01323 545 ProSiteProfiles QLQ domain profile. 137 172 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac9g01323 545 MobiDBLite consensus disorder prediction 234 300 - -
Phac9g01323 545 MobiDBLite consensus disorder prediction 276 300 - -
Phac9g01323 545 MobiDBLite consensus disorder prediction 245 260 - -
Phac9g01323 545 PANTHER GROWTH-REGULATING FACTOR 5 124 440 IPR031137 GO:0005634|GO:0006351|GO:0032502
Phac9g01323 545 MobiDBLite consensus disorder prediction 8 24 - -
Phac9g01323 545 SMART QLQ_2 136 172 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac9g01323 545 MobiDBLite consensus disorder prediction 472 545 - -
Phac9g01323 545 Pfam WRC 203 245 IPR014977 -
Phac9g01323 545 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01323 Phac-Chr9 10420585 10424439 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01323 128 245 GRF Transcription Factor Family AT5G53660 56.780 1.24e-36 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Phac9g01323 WRC 5.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01323 - - gmx:100803096 721.079