Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01321 ATGGGTGAGTTTGGTGTTTCCCACACGAGAAAAAGAAGCAGCAGCAACAACAGTGGTGGTAGCGTTGTTGGGTTGGATGTGAAACTGCAGAGCCCTGAAGCATTATTCCATAATAAGATGACGATGATGGCTCATCATAATCATCACCACCGTCCATTGTCATCACCCTTTGATAATGATTCCTGTGCTGGTGATGGCGATGGTCCCACGGCTTACATGTCTTTTACTAATCATATAAACCTTGTTAGTGGAGCTTCTGTTCTCGCTCCTGCTATTGATGGTGGCTGTGGTGCTCCTGCACCTGTAAGGACTTTGCAGCCTTTTGACATTTCTCCTTATACTTCTCCCACCACCACCTCTTCTACCTTCAAACCCTCAGCAGGTGGGATGGCGGCTTCGTTGGGGTTTCCTTTCACAAGTGCACAATGGAGAGAGCTTGAAAGACAAGCCATGATATACAAGTACATGATGGCTTCTGTTCCTGTTCCACCTGATCTCCTCATCCATACTTCACTCACATCCTCTTCTCGCTCTGCCTGCAGTATGAATGACCCTTTGCTTTCTCTGGATGGTGGTTTCAATCTGAGGTTGGCTAGTAGCACTGACCCGGAGCCAGGTAGGTGTAGAAGAACAGATGGCAAAAAATGGAGATGTTCAAGAGATGTGGCTCCAAACCACAAGTACTGCGAGCGCCACATGCATAGAGGGCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTAACACCAAGACCACCACTCCCACTAGCATCAACAACAGCCACCAAATCAAGAGGCCTCGCCATGAGTCTAATCCTTTTCCTTCTATACCTGATGTTACCGTGGCTATTTCTAACCCCACATCTAGAAAACATGGATCTTCACCCCATTTTCTTGGCTCTTCCACCACTCCGCCATACCTTGAATCTCCCCTCTCTCTTGCTAACTTTAGTCTCAAAGCTGCAAATTTTGACTCCATGGCTTCTGTTTCTGCAAATAAGGAGCCCAGGGGTTTGGAGTGGATGCTGAATGGAGATCCTATTTCCCTGGGTGCTTCTGACTCAGAATGGCAGTCTCTGATGCATAACAAAGTTGGACTGAGCAGCGAGAGTTGTTGTAATAACACCCAGCCTCAGTATCTGAATTCATTTGCACTATACAACACTGGACTGGATCAGCAAAACAGACGCCATCCTTTCCTGAATCCTCTGATTGTCCCCATGGAAAATCTCCAACCAGAGAAGACGAGGGGTTTCATTGATGCTTGGTCCAACACAGAAACTGGTGAAAACAATGCCGCCACCACCACCACCACCAACAATAACAACAACAAGAACTCTGCTGTATCAATTGGTAAATTATCCCTTTCTTCTCTTGATCTATCAAAGGGGGGTGGTGCTGTGAATGAAGATTTAGGTAATGTTAACATAGGGTTGGGCCTAATGGAGTCTATTGCAAACACACACACTGATACCAAAATCTCTCTCTCAAACTGGCTCAACCCAGCACCTTGGGTGGCTTCAACGCTTGGGGGTCCTCTAGCTGAAGTTCTTAGGTCAAGCACAGTCACTGCCACCACCAACACCAACGAAGCAACCTCCAACACACCCTCACCAGCCACTACACATGTTGAATCTAACAGTCCTCTGGGAACAATGGTGTCATCTCCATCTGGGGTGTTGCAGAAAACGCTTGTTTCATTGTCCGATAGCAGTAGCAATAGCAGCCCAACGGTTGCATCATCAAGGGCCAATTCTGAGATGACCTTGCTCAGGTTTCAACCAAATGTAAATTAA 1791 0.4701 MGEFGVSHTRKRSSSNNSGGSVVGLDVKLQSPEALFHNKMTMMAHHNHHHRPLSSPFDNDSCAGDGDGPTAYMSFTNHINLVSGASVLAPAIDGGCGAPAPVRTLQPFDISPYTSPTTTSSTFKPSAGGMAASLGFPFTSAQWRELERQAMIYKYMMASVPVPPDLLIHTSLTSSSRSACSMNDPLLSLDGGFNLRLASSTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVNTKTTTPTSINNSHQIKRPRHESNPFPSIPDVTVAISNPTSRKHGSSPHFLGSSTTPPYLESPLSLANFSLKAANFDSMASVSANKEPRGLEWMLNGDPISLGASDSEWQSLMHNKVGLSSESCCNNTQPQYLNSFALYNTGLDQQNRRHPFLNPLIVPMENLQPEKTRGFIDAWSNTETGENNAATTTTTNNNNNKNSAVSIGKLSLSSLDLSKGGGAVNEDLGNVNIGLGLMESIANTHTDTKISLSNWLNPAPWVASTLGGPLAEVLRSSTVTATTNTNEATSNTPSPATTHVESNSPLGTMVSSPSGVLQKTLVSLSDSSSNSSPTVASSRANSEMTLLRFQPNVN* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01321 596 ProSiteProfiles WRC domain profile. 202 246 IPR014977 -
Phac9g01321 596 Pfam WRC 203 245 IPR014977 -
Phac9g01321 596 PANTHER GROWTH-REGULATING FACTOR 5 120 440 IPR031137 GO:0005634|GO:0006351|GO:0032502
Phac9g01321 596 ProSiteProfiles QLQ domain profile. 137 172 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac9g01321 596 MobiDBLite consensus disorder prediction 234 300 - -
Phac9g01321 596 MobiDBLite consensus disorder prediction 276 300 - -
Phac9g01321 596 MobiDBLite consensus disorder prediction 245 260 - -
Phac9g01321 596 MobiDBLite consensus disorder prediction 523 596 - -
Phac9g01321 596 MobiDBLite consensus disorder prediction 8 24 - -
Phac9g01321 596 SMART QLQ_2 136 172 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac9g01321 596 MobiDBLite consensus disorder prediction 1 24 - -
Phac9g01321 596 Pfam QLQ 137 167 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01321 Phac-Chr9 10420585 10424659 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01321 137 586 GRF Transcription Factor Family AT4G37740 32.969 5.91e-37 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Phac9g01321 WRC 6.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01321 - - gmx:100803096 841.262