Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01319 ATGGGTGAGTTTGGTGTTTCCCACACGAGAAAAAGAAGCAGCAGCAACAACAGTGGTGGTAGCGTTGTTGGGTTGGATGTGAAACTGCAGAGCCCTGAAGCATTATTCCATAATAAGATGACGATGATGGCTCATCATAATCATCACCACCGTCCATTGTCATCACCCTTTGATAATGATTCCTGTGCTGGTGATGGCGATGGTCCCACGGCTTACATGTCTTTTACTAATCATATAAACCTTGTTAGTGGAGCTTCTGTTCTCGCTCCTGCTATTGATGGTGGCTGTGGTGCTCCTGCACCTGTAAGGACTTTGCAGCCTTTTGACATTTCTCCTTATACTTCTCCCACCACCACCTCTTCTACCTTCAAACCCTCAGCAGGTGGGATGGCGGCTTCGTTGGGGTTTCCTTTCACAAGTGCACAATGGAGAGAGCTTGAAAGACAAGCCATGATATACAAGTACATGATGGCTTCTGTTCCTGTTCCACCTGATCTCCTCATCCATACTTCACTCACATCCTCTTCTCGCTCTGCCTGCATGGATGGTGGTTTCAATCTGAGGTTGGCTAGTAGCACTGACCCGGAGCCAGGTAGGTGTAGAAGAACAGATGGCAAAAAATGGAGATGTTCAAGAGATGTGGCTCCAAACCACAAGTACTGCGAGCGCCACATGCATAGAGGGCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTAACACCAAGACCACCACTCCCACTAGCATCAACAACAGCCACCAAATCAAGAGGCCTCGCCATGAGTCTAATCCTTTTCCTTCTATACCTGATGTTACCGTGGCTATTTCTAACCCCACATCTAGAAAACATGGATCTTCACCCCATTTTCTTGGCTCTTCCACCACTCCGCCATACCTTGAATCTCCCCTCTCTCTTGCTAACTTTAGTCTCAAAGCTGCAAATTTTGACTCCATGGCTTCTGTTTCTGCAAATAAGGAGCCCAGGGGTTTGGAGTGGATGCTGAATGGAGATCCTATTTCCCTGGGTGCTTCTGACTCAGAATGGCAGTCTCTGATGCATAACAAAGTTGGACTGAGCAGCGAGAGTTGTTGTAATAACACCCAGCCTCAGTATCTGAATTCATTTGCACTATACAACACTGGACTGGATCAGCAAAACAGACGCCATCCTTTCCTGAATCCTCTGATTGTCCCCATGGAAAATCTCCAACCAGAGAAGACGAGGGGTTTCATTGATGCTTGGTCCAACACAGAAACTGGTGAAAACAATGCCGCCACCACCACCACCACCAACAATAACAACAACAAGAACTCTGCTGTATCAATTGCACCTTGGGTGGCTTCAACGCTTGGGGGTCCTCTAGCTGAAGTTCTTAGGTCAAGCACAGTCACTGCCACCACCAACACCAACGAAGCAACCTCCAACACACCCTCACCAGCCACTACACATGTTGAATCTAACAGTCCTCTGGGAACAATGGTGTCATCTCCATCTGGGGTGTTGCAGAAAACGCTTGTTTCATTGTCCGATAGCAGTAGCAATAGCAGCCCAACGGTTGCATCATCAAGGGCCAATTCTGAGATGACCTTGCTCAGGTTTCAACCAAATGTAAATTAA 1614 0.4758 MGEFGVSHTRKRSSSNNSGGSVVGLDVKLQSPEALFHNKMTMMAHHNHHHRPLSSPFDNDSCAGDGDGPTAYMSFTNHINLVSGASVLAPAIDGGCGAPAPVRTLQPFDISPYTSPTTTSSTFKPSAGGMAASLGFPFTSAQWRELERQAMIYKYMMASVPVPPDLLIHTSLTSSSRSACMDGGFNLRLASSTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVNTKTTTPTSINNSHQIKRPRHESNPFPSIPDVTVAISNPTSRKHGSSPHFLGSSTTPPYLESPLSLANFSLKAANFDSMASVSANKEPRGLEWMLNGDPISLGASDSEWQSLMHNKVGLSSESCCNNTQPQYLNSFALYNTGLDQQNRRHPFLNPLIVPMENLQPEKTRGFIDAWSNTETGENNAATTTTTNNNNNKNSAVSIAPWVASTLGGPLAEVLRSSTVTATTNTNEATSNTPSPATTHVESNSPLGTMVSSPSGVLQKTLVSLSDSSSNSSPTVASSRANSEMTLLRFQPNVN* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01319 537 Pfam WRC 195 237 IPR014977 -
Phac9g01319 537 Pfam QLQ 137 167 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac9g01319 537 ProSiteProfiles WRC domain profile. 194 238 IPR014977 -
Phac9g01319 537 ProSiteProfiles QLQ domain profile. 137 172 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac9g01319 537 MobiDBLite consensus disorder prediction 226 292 - -
Phac9g01319 537 MobiDBLite consensus disorder prediction 268 292 - -
Phac9g01319 537 MobiDBLite consensus disorder prediction 237 252 - -
Phac9g01319 537 PANTHER GROWTH-REGULATING FACTOR 5 118 427 IPR031137 GO:0005634|GO:0006351|GO:0032502
Phac9g01319 537 MobiDBLite consensus disorder prediction 8 24 - -
Phac9g01319 537 SMART QLQ_2 136 172 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac9g01319 537 MobiDBLite consensus disorder prediction 464 537 - -
Phac9g01319 537 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01319 Phac-Chr9 10420585 10424439 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01319 128 237 GRF Transcription Factor Family AT5G53660 59.091 1.64e-37 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Phac9g01319 WRC 5.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01319 - - gmx:100803096 738.799