Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01318 ATGGGTGAGTTTGGTGTTTCCCACACGAGAAAAAGAAGCAGCAGCAACAACAGTGGTGGTAGCGTTGTTGGGTTGGATGTGAAACTGCAGAGCCCTGAAGCATTATTCCATAATAAGATGACGATGATGGCTCATCATAATCATCACCACCGTCCATTGTCATCACCCTTTGATAATGATTCCTGTGCTGGTGATGGCGATGGTCCCACGGCTTACATGTCTTTTACTAATCATATAAACCTTGTTAGTGGAGCTTCTGTTCTCGCTCCTGCTATTGATGGTGGCTGTGGTGCTCCTGCACCTGTAAGGACTTTGCAGCCTTTTGACATTTCTCCTTATACTTCTCCCACCACCACCTCTTCTACCTTCAAACCCTCAGCAGGTGGGATGGCGGCTTCGTTGGGGTTTCCTTTCACAAGTGCACAATGGAGAGAGCTTGAAAGACAAGCCATGATATACAAGTACATGATGGCTTCTGTTCCTGTTCCACCTGATCTCCTCATCCATACTTCACTCACATCCTCTTCTCGCTCTGCCTGCATGGATGGTGGTTTCAATCTGAGGTTGGCTAGTAGCACTGACCCGGAGCCAGGTAGGTGTAGAAGAACAGATGGCAAAAAATGGAGATGTTCAAGAGATGTGGCTCCAAACCACAAGTACTGCGAGCGCCACATGCATAGAGGGCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTAACACCAAGACCACCACTCCCACTAGCATCAACAACAGCCACCAAATCAAGAGGCCTCGCCATGAGTCTAATCCTTTTCCTTCTATACCTGATGTTACCGTGGCTATTTCTAACCCCACATCTAGAAAACATGGATCTTCACCCCATTTTCTTGGCTCTTCCACCACTCCGCCATACCTTGAATCTCCCCTCTCTCTTGCTAACTTTAGTCTCAAAGCTGCAAATTTTGACTCCATGGCTTCTGTTTCTGCAAATAAGGAGCCCAGGGGTTTGGAGTGGATGCTGAATGGAGATCCTATTTCCCTGGGTGCTTCTGACTCAGAATGGCAGTCTCTGATGCATAACAAAGTTGGACTGAGCAGCGAGAGTTGTTGTAATAACACCCAGCCTCAGTATCTGAATTCATTTGCACTATACAACACTGGACTGGATCAGCAAAACAGACGCCATCCTTTCCTGAATCCTCTGATTGTCCCCATGGAAAATCTCCAACCAGAGAAGACGAGGGGTTTCATTGATGCTTGGTCCAACACAGAAACTGGTGAAAACAATGCCGCCACCACCACCACCACCAACAATAACAACAACAAGAACTCTGCTGTATCAATTGGTAAATTATCCCTTTCTTCTCTTGATCTATCAAAGGGGGGTGGTGCTGTGAATGAAGATTTAGGTAATGTTAACATAGGGTTGGGCCTAATGGAGTCTATTGCAAACACACACACTGATACCAAAATCTCTCTCTCAAACTGGCTCAACCCAGCACCTTGGGTGGCTTCAACGCTTGGGGGTCCTCTAGCTGAAGTTCTTAGGTCAAGCACAGTCACTGCCACCACCAACACCAACGAAGCAACCTCCAACACACCCTCACCAGCCACTACACATGTTGAATCTAACAGTCCTCTGGGAACAATGGTGTCATCTCCATCTGGGGTGTTGCAGAAAACGCTTGTTTCATTGTCCGATAGCAGTAGCAATAGCAGCCCAACGGTTGCATCATCAAGGGCCAATTCTGAGATGACCTTGCTCAGGTTTCAACCAAATGTAAATTAA 1767 0.4709 MGEFGVSHTRKRSSSNNSGGSVVGLDVKLQSPEALFHNKMTMMAHHNHHHRPLSSPFDNDSCAGDGDGPTAYMSFTNHINLVSGASVLAPAIDGGCGAPAPVRTLQPFDISPYTSPTTTSSTFKPSAGGMAASLGFPFTSAQWRELERQAMIYKYMMASVPVPPDLLIHTSLTSSSRSACMDGGFNLRLASSTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVNTKTTTPTSINNSHQIKRPRHESNPFPSIPDVTVAISNPTSRKHGSSPHFLGSSTTPPYLESPLSLANFSLKAANFDSMASVSANKEPRGLEWMLNGDPISLGASDSEWQSLMHNKVGLSSESCCNNTQPQYLNSFALYNTGLDQQNRRHPFLNPLIVPMENLQPEKTRGFIDAWSNTETGENNAATTTTTNNNNNKNSAVSIGKLSLSSLDLSKGGGAVNEDLGNVNIGLGLMESIANTHTDTKISLSNWLNPAPWVASTLGGPLAEVLRSSTVTATTNTNEATSNTPSPATTHVESNSPLGTMVSSPSGVLQKTLVSLSDSSSNSSPTVASSRANSEMTLLRFQPNVN* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01318 588 PANTHER GROWTH-REGULATING FACTOR 5 119 432 IPR031137 GO:0005634|GO:0006351|GO:0032502
Phac9g01318 588 Pfam WRC 195 237 IPR014977 -
Phac9g01318 588 ProSiteProfiles WRC domain profile. 194 238 IPR014977 -
Phac9g01318 588 ProSiteProfiles QLQ domain profile. 137 172 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac9g01318 588 MobiDBLite consensus disorder prediction 237 252 - -
Phac9g01318 588 MobiDBLite consensus disorder prediction 268 292 - -
Phac9g01318 588 MobiDBLite consensus disorder prediction 226 292 - -
Phac9g01318 588 MobiDBLite consensus disorder prediction 515 588 - -
Phac9g01318 588 MobiDBLite consensus disorder prediction 8 24 - -
Phac9g01318 588 SMART QLQ_2 136 172 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac9g01318 588 Pfam QLQ 137 167 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac9g01318 588 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01318 Phac-Chr9 10420585 10424439 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01318 402 564 GRF Transcription Factor Family AT5G53660 34.659 1.28e-12 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Phac9g01318 WRC 6.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01318 - - gmx:100803096 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01318 9 10420585 10424439 Phac9g01318 9 10420585 10424439 ECH