Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01316 ATGATCAACATTCCACTTTTCTTGCTCTCTTCTTTCCTATTTCATCATTTCCATGCCATCTCATGCAACACTAACACAGACACAGATGTCCTTCTTTCTTTCAAATCTCAAGTCACTGACCCAAAAAATGCTCTCTCTGGGTGGTCTGCACACTCCAACCACTGCAACTGGTATGGTGTCACATGCACCAAAGTGGGAAATAGGGTCCAATCTCTCAATCTACCAGGACTTTCTCTCTCTGCCAAACTATCTCCTCACCTTTCCGACCTCACTTTCCTACAATCACTTGACCTTTCCAACAACAACTTTCATGGCCAAATTCCCAAAGACTTTGCCCATCTCTCACTTCTCAGTGTCATTAAATTACCTTCAAACAACCTCAGTGGTACACTTCCACCACAGCTGGGCCATCTCCACCGTCTAAAATTTTTGGACTTTTCAGTCAATAAAATCACAGGTCAAATTCCTCAATCATTTGGTAATCTATCTTCTCTTGAGAATCTTTCCTTGGCAAGGAACGGTTTGGAGGGTGAGATTCCAACTGAACTTGGTAATCTCGCCAATCTTTCCATTCTTCAATTATCAGAAAACAGTTTCTCTGGCAAATTTCCCACTTCTATCTTCAACATCTCTTCATTAGTCTTTTTATCCGTGACAAGCAACCATCTTACGGGTAAGTTACCGCAAAATCTTGGCCATTTTCTTCCAAATTTAGAAAATCTAGTTCTTGCATCCAATATGTTTGAAGGGGTAATTCCGAATTCCATATCCAATGCCTCACATCTTCAAGAGATTGACCTTGCTAACAATAAATTTACTGGACCCATACCTCTATTCTACAACTTAAAAAACCTTACCCGCCTCAGTCTTGGTAATAATTCTCTCTCTTCCACAACCTCATTAAATTTCCAGTTCTTTAATTCCCTTAGAAACTCCACCCAGTTACAAATTCTCATGATCAATGATAACCATTTGGCTGGGGACCTTCCTAGCTCTGTTGCTAATCTTTCCCGGAATCTCCAACAAATCTGTGTAGCTAATAATTCTCTTACTGGTACCATTCCTCAAGGAATGAACAAATTCCAAAATCTCATATCCTTTTCTTTTGAAATCAATTATTTCGCTGGAGAGTTACCACAAGAATTAGGGGCACTAAATAATTTACAGAATCTTAGGATAGACAGCAACAGATTCTCTGGGGAAATTCCAGACATTTTTGGCAATCTCACAAATCTGAATACCCTTGCAATGGGAAATAACCAGCTCTCGGGTAGAATTCACCAAAGTATTGGACAATGCACGAGATTAAGTACTCTTGACTTGGGAATGAATAGACTTGGTGGGACCATACCGAATGAGACTTTTCAGCCTTCTGGCTTAAGAATCTTGTATTTAGCAGGAAACTCTTTGCAGGGTCAGCTTCCTCCTAAGGTCGGCACCATGAAACAACTTGAGACCTTGGATATTTCAGGCAACCAGTTCTCAGGGAACATTCCTAAGGAAATAGAGTATTGTTCCAACTTGAAGACACTTGTGATGTCAAGAAACAAATTCAATGGATCAGTCCCAACTAATCTTGGGAATTTAGCATCCCTTGAGACTTTGGATTTATCATTAAACAATCTCACTGGTGTTATTCCTGAAAGTTTAGAAAAGCTCGAGTATATACAGAAATTAAATTTGTCTTTCAACCATTTGGAAGGGGAGGTTCCTCTGAAAGGTCTGTTTACGAACCTTACCAAATTTGATCTACGAGGTAACAATCAACTATGTAGCCTCAACAAGGAAATTGTGCAAAATTTGGGAGTACTCCTGTGTGTTGTTGGAAAAAAGAAAAGAAAAATCTTACTCCCTACCATACTTGCAGTAGTTGGAGCTACTGCTTTGTTCATTTCACTGCTCTTTCTGTTTTGGAAAATGAAGAAGAAAAGAAAGGAGAGGAAAACCAGTGTGTCATCTGAACCTTTTAGGGGGTTGCCTCCAAATATAACTTATGGTGACATTCGCATAGCTACAGACAATTTTGCAGCTGAAAACTTAATTGGAAAAGGAGCTTTTGGCTCTGTGTACAAAGGTGTGTTCAGCTTCAGCTCTGGTGAAACCGCCACCCTTGCTGTCAAAGTCCTGGACCTGCAACAAAGCAAAGCGTCTAAGAGTTTTAATGCGGAATGTGAAGCTTTGAAAAATGTTAGGCATCGGAACTTGGTGAAGGTTATCACTTCTTGCTCCAGCCTTGATTATAATGGGGAGGAATTTAAGGCCCTTGTCATGCAATTCATGCCCAATGGCAACTTGGACTTGAAAATACACCCAGGAGATGAAGAGTCAGGATCCATTCTAACCTTGATGCAAAGATTGAGCATTGCCATTGATGTTGCTTCTGCTGTGGAGTACTTGCACCATGACTGTCATCCACCAATAGCTCATTGTGATCTGAAACCTGCCAATGTCCTTCTAGATGAAAACATGACTGCACATGTTGTAGATTTTGGATTGGCAAGGTTTCTGTCTCAAAGCACATCAGAGAAGCAGAGTAGCACTCTAGGACTGAAAGGATCAATTGGCTACATTGCCCCAGAATATGGTTTTGGAAGCAAGGCTTCAACTGAGGGCGATGTGTACAGTTTTGGGATCCTAGTGCTAGAGATGTTCACAGGAAAAAGACCAACTGATGAAATGTTCAAAGAAGGATTAAGCCTCAGCAAATTTGTCTCAGCTATGGATGAGAATGAAGTAGTGATGATGGGTGGTGATAGAAGGATGATTGAGGATTATGGATATTCAAGACAAAGCTCAAACAGTGATGATCATAGCAGTGGCTTTGGCAGCAACACACATTGGATGCGTAAAGCTGAGGAGTGCATCGCTGATGTGATAAGAGTTGGTGTGAGTTGCACAGCTGATCAACCCAAAGAACGATGGAGCATGAGAGATGCCTTATCAAAATTGCAAGCTATTAAACACTCTATGCTGCCTTTTTGA 2982 0.4074 MINIPLFLLSSFLFHHFHAISCNTNTDTDVLLSFKSQVTDPKNALSGWSAHSNHCNWYGVTCTKVGNRVQSLNLPGLSLSAKLSPHLSDLTFLQSLDLSNNNFHGQIPKDFAHLSLLSVIKLPSNNLSGTLPPQLGHLHRLKFLDFSVNKITGQIPQSFGNLSSLENLSLARNGLEGEIPTELGNLANLSILQLSENSFSGKFPTSIFNISSLVFLSVTSNHLTGKLPQNLGHFLPNLENLVLASNMFEGVIPNSISNASHLQEIDLANNKFTGPIPLFYNLKNLTRLSLGNNSLSSTTSLNFQFFNSLRNSTQLQILMINDNHLAGDLPSSVANLSRNLQQICVANNSLTGTIPQGMNKFQNLISFSFEINYFAGELPQELGALNNLQNLRIDSNRFSGEIPDIFGNLTNLNTLAMGNNQLSGRIHQSIGQCTRLSTLDLGMNRLGGTIPNETFQPSGLRILYLAGNSLQGQLPPKVGTMKQLETLDISGNQFSGNIPKEIEYCSNLKTLVMSRNKFNGSVPTNLGNLASLETLDLSLNNLTGVIPESLEKLEYIQKLNLSFNHLEGEVPLKGLFTNLTKFDLRGNNQLCSLNKEIVQNLGVLLCVVGKKKRKILLPTILAVVGATALFISLLFLFWKMKKKRKERKTSVSSEPFRGLPPNITYGDIRIATDNFAAENLIGKGAFGSVYKGVFSFSSGETATLAVKVLDLQQSKASKSFNAECEALKNVRHRNLVKVITSCSSLDYNGEEFKALVMQFMPNGNLDLKIHPGDEESGSILTLMQRLSIAIDVASAVEYLHHDCHPPIAHCDLKPANVLLDENMTAHVVDFGLARFLSQSTSEKQSSTLGLKGSIGYIAPEYGFGSKASTEGDVYSFGILVLEMFTGKRPTDEMFKEGLSLSKFVSAMDENEVVMMGGDRRMIEDYGYSRQSSNSDDHSSGFGSNTHWMRKAEECIADVIRVGVSCTADQPKERWSMRDALSKLQAIKHSMLPF* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01316 993 SMART LRR_typ_2 282 308 IPR003591 -
Phac9g01316 993 SMART LRR_typ_2 385 408 IPR003591 -
Phac9g01316 993 SMART LRR_typ_2 90 113 IPR003591 -
Phac9g01316 993 SMART LRR_typ_2 138 161 IPR003591 -
Phac9g01316 993 SMART LRR_typ_2 162 186 IPR003591 -
Phac9g01316 993 SMART LRR_typ_2 434 457 IPR003591 -
Phac9g01316 993 SMART LRR_typ_2 235 258 IPR003591 -
Phac9g01316 993 SMART LRR_typ_2 481 505 IPR003591 -
Phac9g01316 993 SMART LRR_typ_2 529 552 IPR003591 -
Phac9g01316 993 SMART LRR_typ_2 409 433 IPR003591 -
Phac9g01316 993 ProSiteProfiles Leucine-rich repeat profile. 531 552 IPR001611 GO:0005515
Phac9g01316 993 FunFam Leucine-rich repeat receptor-like kinase 26 141 - -
Phac9g01316 993 Gene3D Phosphorylase Kinase; domain 1 636 759 - -
Phac9g01316 993 SMART serkin_6 675 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01316 993 Pfam Protein tyrosine and serine/threonine kinase 678 927 IPR001245 GO:0004672|GO:0006468
Phac9g01316 993 Gene3D Ribonuclease Inhibitor 279 599 IPR032675 -
Phac9g01316 993 ProSiteProfiles Leucine-rich repeat profile. 284 305 IPR001611 GO:0005515
Phac9g01316 993 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 760 992 - -
Phac9g01316 993 ProSitePatterns Protein kinases ATP-binding region signature. 681 707 IPR017441 GO:0005524
Phac9g01316 993 Gene3D Ribonuclease Inhibitor 178 278 IPR032675 -
Phac9g01316 993 SUPERFAMILY L domain-like 24 309 - -
Phac9g01316 993 Gene3D Ribonuclease Inhibitor 23 177 IPR032675 -
Phac9g01316 993 FunFam Leucine-rich repeat protein kinase family protein 158 299 - -
Phac9g01316 993 Pfam Leucine Rich Repeat 93 114 IPR001611 GO:0005515
Phac9g01316 993 SUPERFAMILY Protein kinase-like (PK-like) 649 984 IPR011009 -
Phac9g01316 993 Gene3D Transferase(Phosphotransferase) domain 1 760 991 - -
Phac9g01316 993 ProSiteProfiles Protein kinase domain profile. 675 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01316 993 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Phac9g01316 993 SMART LRR_sd22_2 481 507 - -
Phac9g01316 993 SMART LRR_sd22_2 282 303 - -
Phac9g01316 993 SMART LRR_sd22_2 576 595 - -
Phac9g01316 993 SMART LRR_sd22_2 529 558 - -
Phac9g01316 993 SMART LRR_sd22_2 138 170 - -
Phac9g01316 993 PANTHER OS04G0122200 PROTEIN 79 184 - -
Phac9g01316 993 FunFam LRR receptor-like serine/threonine-protein kinase EFR 645 759 - -
Phac9g01316 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Phac9g01316 993 SUPERFAMILY L domain-like 338 594 - -
Phac9g01316 993 FunFam LRR receptor-like serine/threonine-protein kinase EFR 301 611 - -
Phac9g01316 993 Pfam Leucine rich repeat 236 295 IPR001611 GO:0005515
Phac9g01316 993 Pfam Leucine rich repeat 387 446 IPR001611 GO:0005515
Phac9g01316 993 Pfam Leucine rich repeat 506 566 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01316 Phac-Chr9 10414651 10417840 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01316 26 988 Receptor kinase-like Gene Family AT3G47570 41.112 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Phac9g01316 PK_Tyr_Ser-Thr 3.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01316 - - gmx:100776054 1467.98