Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01310 ATGTCACAGCCAAGGCAAAACAAGATGATGAGTCCAAACCTTGCCAAACAAGTTGGTGACACAACCTATACTAAGATCTTTGTTGGAGGATTGGCCTGGGAGACCAAGGGAGACTCTCTGAAACGCTATTTTGATCAGTTTGGGGAGATCTTAGAGGCGGTTGTCATCACTGATAGAATCACTGGAAGATCAAAAGGATATGGCTTTGTGACCTTCAAGGACCCAAATTCTGCAGCAAGGGCTTGTCTGAATCCCTATCCTGTGATTGATGGAAGGAGAGCTAATTGTAATCTTGCATCCCTTGGTGCCCATAAATATGATCCATCTACAACAGAAAGACAAAAATTCAGTAGCCCTTCATGGAATATGGCACCAGTCCCATTTCAAGGCACCTCCACTTATTATAATCAACACATACCTCACTACCCATTTTCGTATCCAGCCTACAGGTATCCTGGTTTTACTCATCCACAAGACTTGTATGAAATGGACTACAATAATGCATATGGTGGACAGCAGTTTTCCCTCCGCTGGTACCCAGCGTATTGCCAGCCCTTTTATGGCCTTGGTAGACAGATTATTCCAACAACCTATGTTAAAAAGGTCATCCCTGACATGTCATCTCAGGAGCTCACAGTTGTTGGCTTCTCAGAACCTACTTCAGCTTCTGCCTCAATTCCTAGCACTGGTTGTTGTGTATTGAGATTAGATACTGGAGCAGTACCTGCCTCAGAAGTGTTAGAATCCCCTCAAGAACAGACATCTTCAACTCCTTAA 777 0.4389 MSQPRQNKMMSPNLAKQVGDTTYTKIFVGGLAWETKGDSLKRYFDQFGEILEAVVITDRITGRSKGYGFVTFKDPNSAARACLNPYPVIDGRRANCNLASLGAHKYDPSTTERQKFSSPSWNMAPVPFQGTSTYYNQHIPHYPFSYPAYRYPGFTHPQDLYEMDYNNAYGGQQFSLRWYPAYCQPFYGLGRQIIPTTYVKKVIPDMSSQELTVVGFSEPTSASASIPSTGCCVLRLDTGAVPASEVLESPQEQTSSTP* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01310 258 SUPERFAMILY RNA-binding domain, RBD 9 99 IPR035979 GO:0003676
Phac9g01310 258 Gene3D - 1 113 IPR012677 -
Phac9g01310 258 PANTHER BOULE-RELATED 7 195 - -
Phac9g01310 258 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 26 81 IPR000504 GO:0003723
Phac9g01310 258 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 24 101 IPR000504 GO:0003723
Phac9g01310 258 CDD RRM_RBM24_RBM38_like 24 99 - -
Phac9g01310 258 SMART rrm1_1 25 97 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01310 Phac-Chr9 10308099 10310059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01310 8 154 C2H2 Transcription Factor Family AT2G19380 30.952 1.66e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01310 - - gmx:100788634 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01310 9 10308099 10310059 Phac9g01310 9 10308099 10310059 ECH