Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01298 ATGGCTGCTATGGATTCCGGTGTTCAGGGTTGCATCTTATCCGTTTTAATTCTCCACGACGAGGAAATCGCAGTCACGGCCGAGAAGATCAACGCTTTGTTGAAGGCTGCCAATGTCTCCACCGAGTCTTACTGGCCAAGCCTCTTTGCTAAGCTCTCTCAGAATAAGAACATCGAAGACCTCATCTTGAACGCCGGTGGTGGAGGTGCCGCCGTCGCTGTCGCTGCTCCCGCAGCCGGTGGTGCTGGTGCCGCTGCTGCAGCACCCGCCGTTGAGGAAAAGAAGGAAGAAGTGAAGGAAGAAAGTGATGACGACATGGGATTCGGTTTGTTTGATTAG 339 0.5339 MAAMDSGVQGCILSVLILHDEEIAVTAEKINALLKAANVSTESYWPSLFAKLSQNKNIEDLILNAGGGGAAVAVAAPAAGGAGAAAAAPAVEEKKEEVKEESDDDMGFGLFD* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01298 112 Gene3D - 7 66 IPR038716 -
Phac9g01298 112 Pfam 60s Acidic ribosomal protein 25 111 - -
Phac9g01298 112 FunFam 60S acidic ribosomal protein P1 3 66 - -
Phac9g01298 112 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 4 112 - -
Phac9g01298 112 CDD Ribosomal_P1 9 111 - -
Phac9g01298 112 MobiDBLite consensus disorder prediction 90 106 - -
Phac9g01298 112 MobiDBLite consensus disorder prediction 86 112 - -
Phac9g01298 112 Hamap 50S ribosomal protein L12 [rpl12]. 9 112 IPR027534 GO:0003735|GO:0005840|GO:0006414
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01298 4 112 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 52.212 1.14e-33 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01298 K02942 - gmx:100801741 136.346