Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01287 ATGGAGCATGATATTTGCAAAAACATCCCTGTCATAATGATGTCTTCCCAAGATTCAATTAGCACAGTATACAAATGCATGCTGAGAGGTGCTGCCGATTATCTTGTTAAGCCAATAAGGAAAAATGAACTGAGAAATTTGTGGCAACATGTTTGGAGAAGACAATCATCAGCCACTGGCACAAATGGTCCCCAAGATGAGAGTGTTGCACAGCAGAAGGTTGAAGCCACTGCTGAAAATAATGCTGCTAGCAATCGTTCAAGTGGTGATGCTGCCTGCATTCAGAGAAATATGGAATTAATTGAGAAAGGAAGTGATGCACAGAGCTCTTGTACTAAGCCTGACTTGGAAGCTGAGAGTGGCCCTGTGGATAACATGCTGGAATTTTCTCCGGTGAAAGGTGGGGAAGAATATCCAAATGAAGAAGAGACTCAAGAGGTTGAAACATGCATTCGTTTAGGACGGACATTGATGATGAATGACAGTCATGCTGGAGGATTAACTATACAGAGAAATGGTGAGGCAAGCACAACTAATGACAAGGATGCTGATCCAGAGCATTTGGGGAATGCTAGCATCAGTGGTGAGGCTCATGACAATCACTATGTTCAAATTAACTCTTCCAGGGAAGCTATTGACTTGATAGGAGCATTTCATACTCATCCCAACTGCATGGTAAAGAGTCCCACAGTTGATTGCACGGGCAAAGTTGACCTTTCTCCTCAATTAGATCTTTCTCTGAGAAGATCTCGTCCCAGCAGCTTTGAGAATGAACTCACTGAAGAAAGGCACACCCTGATGCATTCTAATGCTTCGGCCTTCAAGCGGTATACTAACAGGCAATTGCAAGTATTGACGCCTGCAGCGCTAATTAACTTCTCTGATCAACAAAGAGATCAGAGAGCAAATGGTGAGAAAAGCATCTCACACGTTGTTACTGGCTGCAACTCCGATAGTTCAACACCAGTAAAGGGTGTAAGGTTCAATGATCTATGGACAGCCTATGGTTCTGTACTTCCTTCAATGTTTCGTACACAGTCAGGTCCACCAACAATGCCAAGTCCAAGTTCAGTTGTACTTCTTGAACCAAACTTTCAAAATGCTTTTCATCAGTCAAGCATGAAAGAGAGTAGTTCGGAGCAGCTTTATGAACCTCTTGGTCCAAATGGAAACAGTTCCCAGAACCACATTGTGTACACACAGGAGCACAAAACAGAACATGCAGAGGTTCGAGGGCATATCTCTCCTACAACTGATCAAAGTGTGTCAAGTAGTTTCTGTAATGGAAACGCAAGCCATCTTAACAGCATCGGTTATGGAAGCAACTGTGGAAGTATTAGCAATGTTGATCAAGTTACCACTGTCAGGGTAGCTTCAGAGAGCAAGAATGAGGACCTCACAAACAATGCAAACTCTCATCGATCAGTCCAAAGAGAAGCAGCACTAAACAAATTCCGGTTGAAAAGAAAAGAGAGATGCTATGAGAAGAAGGTTCGATATGAGAGCAGAAAGAAACTAGCAGAGCAGCGTCCCAGAGTGAAAGGACAGTTTGTTCGTCAAGTTCAGCCTGATGGTCTTGTTGCAGAACAAGATGGTAAAGAATATGATCATTCACAGATTTCTGACTTGCTGGAGAGGAGAGCATGA 1647 0.4311 MEHDICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRNLWQHVWRRQSSATGTNGPQDESVAQQKVEATAENNAASNRSSGDAACIQRNMELIEKGSDAQSSCTKPDLEAESGPVDNMLEFSPVKGGEEYPNEEETQEVETCIRLGRTLMMNDSHAGGLTIQRNGEASTTNDKDADPEHLGNASISGEAHDNHYVQINSSREAIDLIGAFHTHPNCMVKSPTVDCTGKVDLSPQLDLSLRRSRPSSFENELTEERHTLMHSNASAFKRYTNRQLQVLTPAALINFSDQQRDQRANGEKSISHVVTGCNSDSSTPVKGVRFNDLWTAYGSVLPSMFRTQSGPPTMPSPSSVVLLEPNFQNAFHQSSMKESSSEQLYEPLGPNGNSSQNHIVYTQEHKTEHAEVRGHISPTTDQSVSSSFCNGNASHLNSIGYGSNCGSISNVDQVTTVRVASESKNEDLTNNANSHRSVQREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVQPDGLVAEQDGKEYDHSQISDLLERRA* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01287 548 Gene3D - 1 121 - -
Phac9g01287 548 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 112 526 IPR045281 GO:0009909
Phac9g01287 548 SUPERFAMILY CheY-like 6 57 IPR011006 -
Phac9g01287 548 MobiDBLite consensus disorder prediction 55 90 - -
Phac9g01287 548 Pfam CCT motif 478 520 IPR010402 GO:0005515
Phac9g01287 548 MobiDBLite consensus disorder prediction 104 125 - -
Phac9g01287 548 MobiDBLite consensus disorder prediction 529 548 - -
Phac9g01287 548 ProSiteProfiles Response regulatory domain profile. 1 52 IPR001789 GO:0000160
Phac9g01287 548 MobiDBLite consensus disorder prediction 166 195 - -
Phac9g01287 548 MobiDBLite consensus disorder prediction 524 548 - -
Phac9g01287 548 ProSiteProfiles CCT domain profile. 478 520 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01287 Phac-Chr9 10136159 10141423 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01287 1 522 Response Regulator Gene Family AT5G24470 35.647 2.39e-75 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Phac9g01287 CCT 8.4e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01287 K12130 - gmx:100777119 885.945