Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01286 ATGGGGGAGGTGGTGATGAGCGGAGAGAAGTCAGTGAGAGTGGAGAAGGAAGAGAGTGCGAGTGCTAGCAAGGGTGAATTGAAGGGCTTGATGAGATGGGAGAAGTTTCTGCCTAGGATGATTTTGAGGGTGTTATTGGTTGAAGCCGATGACTCCACAAGGCAGATTATAGCTGCGCTTCTCAGAAAATGCAGCTACAAAGTGGCTGCTGTTTCTGATGGGTTGAAGGCGTGGGAATTACTCAAGGGAAGACCGGGCAATGTTGATCTTATACTGACCGAAGTGGATTTGCCATCCATATCTGGCTATGCACTTCTTACGTTGATTATGGAGCATGATATTTGCAAAAACATCCCTGTCATAATGATGTCTTCCCAAGATTCAATTAGCACAGTATACAAATGCATGCTGAGAGGTGCTGCCGATTATCTTGTTAAGCCAATAAGGAAAAATGAACTGAGAAATTTGTGGCAACATGTTTGGAGAAGACAATCATCAGCCACTGGCACAAATGGTCCCCAAGATGAGAGTGTTGCACAGCAGAAGGTTGAAGCCACTGCTGAAAATAATGCTGCTAGCAATCGTTCAAGTGGTGATGCTGCCTGCATTCAGAGAAATATGGAATTAATTGAGAAAGGAAGTGATGCACAGAGCTCTTGTACTAAGCCTGACTTGGAAGCTGAGAGTGGCCCTGTGGATAACATGCTGGAATTTTCTCCGGTGAAAGGTGGGGAAGAATATCCAAATGAAGAAGAGACTCAAGAGGTTGAAACATGCATTCGTTTAGGACGGACATTGATGATGAATGACAGTCATGCTGGAGGATTAACTATACAGAGAAATGGTGAGGCAAGCACAACTAATGACAAGGATGCTGATCCAGAGCATTTGGGGAATGCTAGCATCAGTGGTGAGGCTCATGACAATCACTATGTTCAAATTAACTCTTCCAGGGAAGCTATTGACTTGATAGGAGCATTTCATACTCATCCCAACTGCATGGTAAAGAGTCCCACAGTTGATTGCACGGGCAAAGTTGACCTTTCTCCTCAATTAGATCTTTCTCTGAGAAGATCTCGTCCCAGCAGCTTTGAGAATGAACTCACTGAAGAAAGGCACACCCTGATGCATTCTAATGCTTCGGCCTTCAAGCGGTATACTAACAGGCAATTGCAAGTATTGACGCCTGCAGCGCTAATTAACTTCTCTGATCAACAAAGAGATCAGAGAGCAAATGGTGAGAAAAGCATCTCACACGTTGTTACTGGCTGCAACTCCGATAGTTCAACACCAGTAAAGGGTGTAAGGTTCAATGATCTATGGACAGCCTATGGTTCTGTACTTCCTTCAATGTTTCGTACACAGTCAGGTCCACCAACAATGCCAAGTCCAAGTTCAGTTGTACTTCTTGAACCAAACTTTCAAAATGCTTTTCATCAGTCAAGCATGAAAGAGAGTAGTTCGGAGCAGCTTTATGAACCTCTTGGTCCAAATGGAAACAGTTCCCAGAACCACATTGTGTACACACAGGAGCACAAAACAGAACATGCAGAGGTTCGAGGGCATATCTCTCCTACAACTGATCAAAGTGTGTCAAGTAGTTTCTGTAATGGAAACGCAAGCCATCTTAACAGCATCGGTTATGGAAGCAACTGTGGAAGTATTAGCAATGTTGATCAAGTTACCACTGTCAGGGTAGCTTCAGAGAGCAAGAATGAGGACCTCACAAACAATGCAAACTCTCATCGATCAGTCCAAAGAGAAGCAGCACTAAACAAATTCCGGTTGAAAAGAAAAGAGAGATGCTATGAGAAGAAGGTTCGATATGAGAGCAGAAAGAAACTAGCAGAGCAGCGTCCCAGAGTGAAAGGACAGTTTGTTCGTCAAGTTCAGCCTGATGGTCTTGTTGCAGAACAAGATGGTAAAGAATATGATCATTCACAGATTTCTGACTTGCTGGAGAGGAGAGCATGA 1974 0.4392 MGEVVMSGEKSVRVEKEESASASKGELKGLMRWEKFLPRMILRVLLVEADDSTRQIIAALLRKCSYKVAAVSDGLKAWELLKGRPGNVDLILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRNLWQHVWRRQSSATGTNGPQDESVAQQKVEATAENNAASNRSSGDAACIQRNMELIEKGSDAQSSCTKPDLEAESGPVDNMLEFSPVKGGEEYPNEEETQEVETCIRLGRTLMMNDSHAGGLTIQRNGEASTTNDKDADPEHLGNASISGEAHDNHYVQINSSREAIDLIGAFHTHPNCMVKSPTVDCTGKVDLSPQLDLSLRRSRPSSFENELTEERHTLMHSNASAFKRYTNRQLQVLTPAALINFSDQQRDQRANGEKSISHVVTGCNSDSSTPVKGVRFNDLWTAYGSVLPSMFRTQSGPPTMPSPSSVVLLEPNFQNAFHQSSMKESSSEQLYEPLGPNGNSSQNHIVYTQEHKTEHAEVRGHISPTTDQSVSSSFCNGNASHLNSIGYGSNCGSISNVDQVTTVRVASESKNEDLTNNANSHRSVQREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVQPDGLVAEQDGKEYDHSQISDLLERRA* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01286 657 MobiDBLite consensus disorder prediction 275 304 - -
Phac9g01286 657 MobiDBLite consensus disorder prediction 633 657 - -
Phac9g01286 657 MobiDBLite consensus disorder prediction 164 199 - -
Phac9g01286 657 Pfam Response regulator receiver domain 44 155 IPR001789 GO:0000160
Phac9g01286 657 Pfam CCT motif 587 629 IPR010402 GO:0005515
Phac9g01286 657 SMART REC_2 42 157 IPR001789 GO:0000160
Phac9g01286 657 MobiDBLite consensus disorder prediction 213 234 - -
Phac9g01286 657 PANTHER TWO-COMPONENT RESPONSE REGULATOR 43 227 IPR045279 GO:0009736
Phac9g01286 657 SUPERFAMILY CheY-like 42 166 IPR011006 -
Phac9g01286 657 ProSiteProfiles CCT domain profile. 587 629 IPR010402 GO:0005515
Phac9g01286 657 ProSiteProfiles Response regulatory domain profile. 43 161 IPR001789 GO:0000160
Phac9g01286 657 MobiDBLite consensus disorder prediction 638 657 - -
Phac9g01286 657 CDD psREC_PRR 44 147 - -
Phac9g01286 657 Gene3D - 40 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01286 Phac-Chr9 10136159 10141423 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01286 27 631 Response Regulator Gene Family AT5G24470 42.045 4.14e-132 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Phac9g01286 Response_reg 2.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01286 K12130 - gmx:100777119 1038.48