Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01284 ATGGGGGAGGTGGTGATGAGCGGAGAGAAGTCAGTGAGAGTGGAGAAGGAAGAGAGTGCGAGTGCTAGCAAGGGTGAATTGAAGGGCTTGATGAGATGGGAGAAGTTTCTGCCTAGGATGATTTTGAGGGTGTTATTGGTTGAAGCCGATGACTCCACAAGGCAGATTATAGCTGCGCTTCTCAGAAAATGCAGCTACAAAGTGGCTGCTGTTTCTGATGGGTTGAAGGCGTGGGAATTACTCAAGGGAAGACCGGGCAATGTTGATCTTATACTGACCGAAGTGGATTTGCCATCCATATCTGGCTATGCACTTCTTACGTTGATTATGGAGCATGATATTTGCAAAAACATCCCTGTCATAATGATGTCTTCCCAAGATTCAATTAGCACAGTATACAAATGCATGCTGAGAGGTGCTGCCGATTATCTTGTTAAGCCAATAAGGAAAAATGAACTGAGAAATTTGTGGCAACATGTTTGGAGAAGACAATCATCAGCCACTGGCACAAATGGTCCCCAAGATGAGAGTGTTGCACAGCAGAAGGTTGAAGCCACTGCTGAAAATAATGCTGCTAGCAATCGTTCAAGTGGTGATGCTGCCTGCATTCAGAGAAATATGGAATTAATTGAGAAAGGAAGTGATGCACAGAGCTCTTGTACTAAGCCTGACTTGGAAGCTGAGAGTGGCCCTGTGGATAACATGCTGGAATTTTCTCCGGTGAAAGGTGGGGAAGAATATCCAAATGAAGAAGAGACTCAAGAGGTTGAAACATGCATTCGTTTAGGACGGACATTGATGATGAATGACAGTCATGCTGGAGGATTAACTATACAGAGAAATGGTGAGGCAAGCACAACTAATGACAAGGATGCTGATCCAGAGCATTTGGGGAATGCTAGCATCAGTGGTGAGGCTCATGACAATCACTATGTTCAAATTAACTCTTCCAGGGAAGCTATTGACTTGATAGGAGCATTTCATACTCATCCCAACTGCATGGTAAAGAGTCCCACAGTTGATTGCACGGGCAAAGTTGACCTTTCTCCTCAATTAGATCTTTCTCTGAGAAGATCTCGTCCCAGCAGCTTTGAGAATGAACTCACTGAAGAAAGGCACACCCTGATGCATTCTAATGCTTCGGCCTTCAAGCGGTATACTAACAGGCAATTGCAAGTATTGACGCCTGCAGCGCTAATTAACTTCTCTGATCAACAAAGAGATCAGAGAGCAAATGGTGAGAAAAGCATCTCACACGTTGTTACTGGCTGCAACTCCGATAGTTCAACACCAGGTATGCAAAGATATATCGTGTCTCCAACTACAGTCCAATCAAAAGAGTCTGAACTTGCAACCTCACACTCTCAACAAGTGCATTCTCTCCCAATTCCAGTAAAGGGTGTAAGGTTCAATGATCTATGGACAGCCTATGGTTCTGTACTTCCTTCAATGTTTCGTACACAGTCAGGTCCACCAACAATGCCAAGTCCAAGTTCAGTTGTACTTCTTGAACCAAACTTTCAAAATGCTTTTCATCAGTCAAGCATGAAAGAGAGTAGTTCGGAGCAGCTTTATGAACCTCTTGGTCCAAATGGAAACAGTTCCCAGAACCACATTGTGTACACACAGGAGCACAAAACAGAACATGCAGAGGTTCGAGGGCATATCTCTCCTACAACTGATCAAAGTGTGTCAAGTAGTTTCTGTAATGGAAACGCAAGCCATCTTAACAGCATCGGTTATGGAAGCAACTGTGGAAGTATTAGCAATGTTGATCAAGTTACCACTGTCAGGGTAGCTTCAGAGAGCAAGAATGAGGACCTCACAAACAATGCAAACTCTCATCGATCAGTCCAAAGAGAAGCAGCACTAAACAAATTCCGGTTGAAAAGAAAAGAGAGATGCTATGAGAAGAAGGTTCGATATGAGAGCAGAAAGAAACTAGCAGAGCAGCGTCCCAGAGTGAAAGGACAGTTTGTTCGTCAAGTTCAGCCTGATGGTCTTGTTGCAGAACAAGATGGTAAAGAATATGATCATTCACAGATTTCTGACTTGCTGGAGAGGAGAGCATGA 2073 0.4385 MGEVVMSGEKSVRVEKEESASASKGELKGLMRWEKFLPRMILRVLLVEADDSTRQIIAALLRKCSYKVAAVSDGLKAWELLKGRPGNVDLILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRNLWQHVWRRQSSATGTNGPQDESVAQQKVEATAENNAASNRSSGDAACIQRNMELIEKGSDAQSSCTKPDLEAESGPVDNMLEFSPVKGGEEYPNEEETQEVETCIRLGRTLMMNDSHAGGLTIQRNGEASTTNDKDADPEHLGNASISGEAHDNHYVQINSSREAIDLIGAFHTHPNCMVKSPTVDCTGKVDLSPQLDLSLRRSRPSSFENELTEERHTLMHSNASAFKRYTNRQLQVLTPAALINFSDQQRDQRANGEKSISHVVTGCNSDSSTPGMQRYIVSPTTVQSKESELATSHSQQVHSLPIPVKGVRFNDLWTAYGSVLPSMFRTQSGPPTMPSPSSVVLLEPNFQNAFHQSSMKESSSEQLYEPLGPNGNSSQNHIVYTQEHKTEHAEVRGHISPTTDQSVSSSFCNGNASHLNSIGYGSNCGSISNVDQVTTVRVASESKNEDLTNNANSHRSVQREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVQPDGLVAEQDGKEYDHSQISDLLERRA* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01284 690 ProSiteProfiles CCT domain profile. 620 662 IPR010402 GO:0005515
Phac9g01284 690 MobiDBLite consensus disorder prediction 275 304 - -
Phac9g01284 690 MobiDBLite consensus disorder prediction 164 199 - -
Phac9g01284 690 MobiDBLite consensus disorder prediction 666 690 - -
Phac9g01284 690 SMART REC_2 42 157 IPR001789 GO:0000160
Phac9g01284 690 SUPERFAMILY CheY-like 42 166 IPR011006 -
Phac9g01284 690 MobiDBLite consensus disorder prediction 213 234 - -
Phac9g01284 690 MobiDBLite consensus disorder prediction 671 690 - -
Phac9g01284 690 Gene3D - 40 229 - -
Phac9g01284 690 Pfam CCT motif 620 662 IPR010402 GO:0005515
Phac9g01284 690 PANTHER TWO-COMPONENT RESPONSE REGULATOR 43 328 IPR045279 GO:0009736
Phac9g01284 690 ProSiteProfiles Response regulatory domain profile. 43 161 IPR001789 GO:0000160
Phac9g01284 690 CDD psREC_PRR 44 147 - -
Phac9g01284 690 Pfam Response regulator receiver domain 44 155 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01284 Phac-Chr9 10136159 10141423 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01284 27 664 Response Regulator Gene Family AT5G24470 40.524 8.02e-131 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Phac9g01284 Response_reg 2.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01284 K12130 - gmx:100777119 1106.66