Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01283 ATGGGGGAGGTGGTGATGAGCGGAGAGAAGTCAGTGAGAGTGGAGAAGGAAGAGAGTGCGAGTGCTAGCAAGGGTGAATTGAAGGGCTTGATGAGATGGGAGAAGTTTCTGCCTAGGATGATTTTGAGGGTGTTATTGGTTGAAGCCGATGACTCCACAAGGCAGATTATAGCTGCGCTTCTCAGAAAATGCAGCTACAAAGTGGCTGCTGTTTCTGATGGGTTGAAGGCGTGGGAATTACTCAAGGGAAGACCGGGCAATGTTGATCTTATACTGACCGAAGTGGATTTGCCATCCATATCTGGCTATGCACTTCTTACGTTGATTATGGAGCATGATATTTGCAAAAACATCCCTGTCATAATGATGTCTTCCCAAGATTCAATTAGCACAGTATACAAATGCATGCTGAGAGGTGCTGCCGATTATCTTGTTAAGCCAATAAGGAAAAATGAACTGAGAAATTTGTGGCAACATGTTTGGAGAAGACAATCATCAGCCACTGGCACAAATGGTCCCCAAGATGAGAGTGTTGCACAGCAGAAGGTTGAAGCCACTGCTGAAAATAATGCTGCTAGCAATCGTTCAAGTGGTGATGCTGCCTGCATTCAGAGAAATATGGAATTAATTGAGAAAGGAAGTGATGCACAGAGCTCTTGTACTAAGCCTGACTTGGAAGCTGAGAGTGGCCCTGTGGATAACATGCTGGAATTTTCTCCGGTGAAAGGTGGGGAAGAATATCCAAATGAAGAAGAGACTCAAGAGGTTGAAACATGCATTCGTTTAGGACGGACATTGATGATGAATGACAGTCATGCTGGAGGATTAACTATACAGAGAAATGGTGAGGCAAGCACAACTAATGACAAGGATGCTGATCCAGAGCATTTGGGGAATGCTAGCATCAGTGGTGAGGCTCATGACAATCACTATGTTCAAATTAACTCTTCCAGGGAAGCTATTGACTTGATAGGAGCATTTCATACTCATCCCAACTGCATGGTAAAGAGTCCCACAGTTGATTGCACGGGCAAAGTTGACCTTTCTCCTCAATTAGATCTTTCTCTGAGAAGATCTCGTCCCAGCAGCTTTGAGAATGAACTCACTGAAGAAAGGCACACCCTGATGCATTCTAATGCTTCGGCCTTCAAGCGGTATACTAACAGGCAATTGCAAGTATTGACGCCTGCAGCGCTAATTAACTTCTCTGATCAACAAAGAGATCAGAGAGCAAATGGTGAGAAAAGCATCTCACACGTTGTTACTGGCTGCAACTCCGATAGTTCAACACCAGGTATGCAAAGATATATCGTGTCTCCAACTACAGTCCAATCAAAAGAGTCTGAACTTGCAACCTCACACTCTCAACAAGTGCATTCTCTCCCAATTCCAGTAAAGGGTGTAAGGTTCAATGATCTATGGACAGCCTATGGTTCTGTACTTCCTTCAATGTTTCGTACACAGTCAGGTCCACCAACAATGCCAAGTCCAAGTTCAGTTGTACTTCTTGAACCAAACTTTCAAAATGCTTTTCATCAGTCAAGCATGAAAGAGAGTAGTTCGGAGCAGCTTTATGAACCTCTTGGTCCAAATGGAAACAGTTCCCAGAACCACATTGTGTACACACAGGAGCACAAAACAGAACATGCAGAGGTTCGAGGGCATATCTCTCCTACAACTGATCAAAGTGTGTCAAGTAGTTTCTGTAATGGAAACGCAAGCCATCTTAACAGCATCGGTTATGGAAGCAACTGTGGAAGTATTAGCAATGTTGATCAAGTTACCACTGTCAGGGTAGCTTCAGAGAGCAAGAATGAGGACCTCACAAACAATGCAAACTCTCATCGATCAGTCCAAAGAGAAGCAGCACTAAACAAATTCCGGTTGAAAAGAAAAGAGAGATGCTATGAGAAGAAGGTTCACCACTACTATCTGTGTAACATTATTATAGGAAGACTACCATTGTTTAAGAAAGATGCTAACTTTCTCCTATACTTTTAA 2001 0.4328 MGEVVMSGEKSVRVEKEESASASKGELKGLMRWEKFLPRMILRVLLVEADDSTRQIIAALLRKCSYKVAAVSDGLKAWELLKGRPGNVDLILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSSQDSISTVYKCMLRGAADYLVKPIRKNELRNLWQHVWRRQSSATGTNGPQDESVAQQKVEATAENNAASNRSSGDAACIQRNMELIEKGSDAQSSCTKPDLEAESGPVDNMLEFSPVKGGEEYPNEEETQEVETCIRLGRTLMMNDSHAGGLTIQRNGEASTTNDKDADPEHLGNASISGEAHDNHYVQINSSREAIDLIGAFHTHPNCMVKSPTVDCTGKVDLSPQLDLSLRRSRPSSFENELTEERHTLMHSNASAFKRYTNRQLQVLTPAALINFSDQQRDQRANGEKSISHVVTGCNSDSSTPGMQRYIVSPTTVQSKESELATSHSQQVHSLPIPVKGVRFNDLWTAYGSVLPSMFRTQSGPPTMPSPSSVVLLEPNFQNAFHQSSMKESSSEQLYEPLGPNGNSSQNHIVYTQEHKTEHAEVRGHISPTTDQSVSSSFCNGNASHLNSIGYGSNCGSISNVDQVTTVRVASESKNEDLTNNANSHRSVQREAALNKFRLKRKERCYEKKVHHYYLCNIIIGRLPLFKKDANFLLYF* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01283 666 Gene3D - 40 229 - -
Phac9g01283 666 MobiDBLite consensus disorder prediction 275 304 - -
Phac9g01283 666 MobiDBLite consensus disorder prediction 164 199 - -
Phac9g01283 666 SUPERFAMILY CheY-like 42 166 IPR011006 -
Phac9g01283 666 PANTHER TWO-COMPONENT RESPONSE REGULATOR 43 326 IPR045279 GO:0009736
Phac9g01283 666 ProSiteProfiles Response regulatory domain profile. 43 161 IPR001789 GO:0000160
Phac9g01283 666 CDD psREC_PRR 44 147 - -
Phac9g01283 666 SMART REC_2 42 157 IPR001789 GO:0000160
Phac9g01283 666 MobiDBLite consensus disorder prediction 213 234 - -
Phac9g01283 666 Pfam Response regulator receiver domain 44 155 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01283 Phac-Chr9 10136159 10141423 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01283 27 642 Response Regulator Gene Family AT5G24470 38.278 1.23e-112 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac9g01283 Response_reg 2.3e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01283 K12130 - gmx:100777119 1023.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01283 9 10136159 10141423 Phac9g01283 9 10136159 10141423 ECH