Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01276 ATGTTGTCCAGATGCTCAAAAGTTTACAGAACTTCCAAGAGAAAAGCTGAAGATATCCCTGAGCATGGTCATAACAAGAATTGTGCTGTAAGGGTGACAGAAAAGATGCGAGAGGTTCTAGAAATCAATAAGAAAGAGCAGCTTACTGTCTCAAACAAGAAAAGGAAATATAAAGATCTCTTGAATGATGATTTAGAAGATGAAGAAATGCTTATTCTGTTAAGGGCAAAAACGAGGAACAGATCAAGAAGAATGAATAATGTGAAGAATGTTGAACAAAAGCCCCGAAATTGTCATCAATGCAAGAAAAAGGGCAGAAGACTTTTTGTGCGTTGTCCTAAATGCCCGAACATGTACTGTATGCAGTGTATTGATAAATGGTACCCTGATATGAAAATAGAAGAAATTGCTGCAAGTTGTCCGTTTTGCCGGAAAAACTGCAATTGCAATGTTTGCTTGTGCTCAAGAGGAGTGATTAAGACATCTAACAGGGACATAACCGATTATGAAAAGGCTCAGTATCTGCATTATATGATTAACTTACTCCTACCGTTTTTGAAACAAATTTGTCATGAACAAAATCAAGAGGAGCAGATTGAAGCTAAAATACTAGGAAATAATTCTTTTGAGAAGGAAATACCTCCAAGTCTTTGTGGCAACGATGAACGTGTCTATTGTGATCACTGTGCTACTTCAATTATTGACCTTCATAGAAGCTGCCCCAGTTGTTCCTATGAACTCTGCCTTAGTTGTTGCCAAGAAATACGTGATGGAAGCATTACACCCCGGGTCGAGCAGAAGTTCTCATATGTGAATAGGGGCTATGATTATATGCATGGTGGAGACCCTCTACCTGTGTCTAATGATTTCGGAACATCAGAATGTCATACCAAGCTATCTAATGTGTGGAATGCTAAGAGTGATGGAAGCATCCGATGTGCACCAAAGGAGTTCGGCGGTTGTGGTAGTGCTGCATTGGAGCTGAGACGTGTCCTACCAAGTGGGTGGATATCTGAATTGGAAATCAGAACTCGCAGTATGCTGAAAATTTGGGAAAATGTAAACACTACTCTTCAGCAAAAAATAGCAGTATCAAGCTACACCTCTTTCAGAAAGGAAGCTATTAAAGTAGACAAAAAGGATGATAATATGTACTGTTCAGAGTCAAGTAACATTCAAAAGGGAGGATTGTCACTTTTCCAAAAGCATTGGGCTAATGGCGAACCAATTATAGTTGCTGACGCCCTTAAACTGGGCACCGGTCTGAGCTGGAAGCCGATGGTAATGTGGCGAGCATTAAGCGAAAATATGGTTTCAGAGGTCGGTTCAAAAATGTCAGAGGTGAAAGCCATTGATTGTCTGGCTAATTGTGAGGTAGAAATCGATACTCATACATTTTTTAAAGGTTATATAGAGGGAAGAACATACAGAAATCTCTGGCCAGAGATGCTCAAGCTAAAAGACTGGCCCCCCTCTGATAAATTTGAAGATCTTTTGCCCCGCCATTGTGATGAGTTTATTCGCTCCTTGCCATTCCAAGAGTACAGCGATCCTCGGAGCGGAATTCTCAATCTTGCTGCGAAGTTGCCAGCACATGTCCTAAAACCTGACATGGGTCCCAAAACATATATTGCCTATGGGATTAAAGAAGAGCTTGGTAGAGGAGACTCTGTAACAAAGCTTCACTGTGATATGTCAGATGCGGTCAATATTTTGACCCATACAGCAGAGGTGATATTAACTGATGAGCAGCACTTAATTATTTCAAAGTTGAAAGAAGCACACAAGGTACAAGATGAGAGAGAGCAGTGTGCTCAAGAAAGGGTTTCTGACAGCCTGAATGGCCGACCTTTCAAACACAACAGAGTACGGAGAGAAAATAAGGTAGTTTTAGAATCCAAAGACATAGAGAAGCGCCCTACTGAAATTAATGGAAGGATCTTTCCAAATGATGTACATGAAGGGGTCACGTCTGCTACAAAGAATGAATCAATGGAAACAGGCAGTGCTCTATGGGATATCTTTCGGAGAGAAGATTCTGAGAAGTTAGAAACATATCTTAGGAAGCACTCAAGAGAATTTAGACATACTTATTGTTCTCCCGTTGAACAGGTTGCACATCCAATTCATGACCAATGTTTTTATTTGACATCGGAGCACAAGAAGAAGCTGAAGGAGGAGTTCGATGTAGAACCGTGGACTTTTGAGCAAAAACTTGGGGAGGCGGTATTTATTCCTGCTGGATGCCCGCATCAAGTCAGGAATCTCAAGTCATGCACAAAAGTTGCGGTAGACTTTGTGTCTCCAGAAAATATCCATGAGTGTCTGCGTTTAACTAATGAATTCCGCCAACTTCCCAAGAACCACAAGGCTAGAGAAGATAAGCTTGAGATAAAGAAGATGATAGTTTATGCCATTGATGAAGCTGTCACAGACCTAAAAGCTTTGCTGAACTTTTCTTGA 2463 0.4076 MLSRCSKVYRTSKRKAEDIPEHGHNKNCAVRVTEKMREVLEINKKEQLTVSNKKRKYKDLLNDDLEDEEMLILLRAKTRNRSRRMNNVKNVEQKPRNCHQCKKKGRRLFVRCPKCPNMYCMQCIDKWYPDMKIEEIAASCPFCRKNCNCNVCLCSRGVIKTSNRDITDYEKAQYLHYMINLLLPFLKQICHEQNQEEQIEAKILGNNSFEKEIPPSLCGNDERVYCDHCATSIIDLHRSCPSCSYELCLSCCQEIRDGSITPRVEQKFSYVNRGYDYMHGGDPLPVSNDFGTSECHTKLSNVWNAKSDGSIRCAPKEFGGCGSAALELRRVLPSGWISELEIRTRSMLKIWENVNTTLQQKIAVSSYTSFRKEAIKVDKKDDNMYCSESSNIQKGGLSLFQKHWANGEPIIVADALKLGTGLSWKPMVMWRALSENMVSEVGSKMSEVKAIDCLANCEVEIDTHTFFKGYIEGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRSLPFQEYSDPRSGILNLAAKLPAHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILTHTAEVILTDEQHLIISKLKEAHKVQDEREQCAQERVSDSLNGRPFKHNRVRRENKVVLESKDIEKRPTEINGRIFPNDVHEGVTSATKNESMETGSALWDIFRREDSEKLETYLRKHSREFRHTYCSPVEQVAHPIHDQCFYLTSEHKKKLKEEFDVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECLRLTNEFRQLPKNHKAREDKLEIKKMIVYAIDEAVTDLKALLNFS* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01276 820 ProSiteProfiles Zinc finger RING-type profile. 98 144 IPR001841 -
Phac9g01276 820 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 19 816 IPR045109 GO:0032454|GO:0033169
Phac9g01276 820 MobiDBLite consensus disorder prediction 1 22 - -
Phac9g01276 820 SUPERFAMILY Clavaminate synthase-like 399 814 - -
Phac9g01276 820 CDD cupin_RmlC-like 707 767 - -
Phac9g01276 820 SMART cupin_9 499 783 IPR003347 -
Phac9g01276 820 Gene3D Cupin 381 792 - -
Phac9g01276 820 ProSiteProfiles JmjC domain profile. 518 783 IPR003347 -
Phac9g01276 820 Pfam JmjC domain, hydroxylase 658 766 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01276 Phac-Chr9 10017547 10028151 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Phac9g01276 JmjC 4.8e-16 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01276 K15601 K21989 gmx:100797860 1300.42