Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01259 ATGAGTTCCGTCGAGTGTTATCCGTCGCGCGGGGACGATGTCGCCGCCGTGTCGCTGGATTCTCTACCGTTAGGGTTCCGATTCAGACCTACCGATGAGGAACTCATCGATTACTACCTGCGACAGAAGATTAACGGCAATGGTGCCGAGGTTTGGGTTATCCGAGAAATTGATGTCTGCAAATGGGAGCCGTGGGACATGCCTGATTTGTCGGTGATACGGAACAAGGATCCGGAATGGTTCTTCTTCTGTCCACAGGACAGAAAGTATCCAAATGGGCATCGATTGAACAGGGCAACGACTCATGGGTATTGGAAGGCAACTGGGAAGGATCGTAGAATTAAGTCTGGGATGATGTTGATTGGAATGAAGAAGACTTTGGTGTTCTACACTGGTCGTGCACCCAAAGGGAAGAGGACTAATTGGGTTATGCACGAATATCGCCCCACCTTGAAGGAGCTTGATGGCACCAATCCTGGACAGAATGCATATGTCCTTTGTCGCTTGTTTAAGAAACACGACGAGAGCCTTGAAGTTTCGCACTGTGATGAGGCAGAACAGACTGCTTCAACTCCGATTGCTGCCAATTACTCTACGGAGGAAATACAGTCTGGTCTGGCTGTTGTTGCAGTGTCCCCATCACTTGTTACAGAGGATGATAAGCACCAGGCAATTATCCCTACGCACTCTGAGGAAGCAATATCCAACGTTATAACTCCTGTTGATTGCCATAGTGATGGATATGATATTTCTGATGCACAAAATAATTATGTGGCACCAGCGGCAGAGGAGTTTCAGCCGTGGAACGTTGATATGTGTTACGATCCAAAAAACGAGCTATTGTATGACAAATTATTTTCCCCTGTACTTGCACATATTCAACCAGAATTTCCTTATCAACCAAACAGTGAACCAGATAGTCGGTATGGGCTTCAATATGGCACCAATGAGACAAACATTTCAGACTTTTTGAATTCTGTTGTTAACTGGGACGAACTACCCTACGAGGAGCCCAATTGTCAACAGTGGAGCTCCCCCTCGTTTAATGTTCAGAATAGTGTTTTAAGCAGCCACATAGATTCTGAACTTGCCAATATGACATACATGCAAGCTGGTTACGCTGAGGAGGCAAACGACAGAAAGATTCCTTTGGTGATAGCTCCAGAATTTTGCAGCACCACTGGCATCCCCATTGACCGTGGTGGTGGTGATGAGCAGAAGAGCAATGTTGAGTTATTTCAAAACAGTTCCCAGAGAGCTTTTACTGATTATCAGCAATGTAGTATCTTCAATGCAGTTCCTTGTGGGGATACTGGAATCATTAGGAAGACACGAGTGGTTCAAAATGAAAAGCTAAGTGCAAACGTAACACAAGGTACAGCGCAGAGGAGAATTCGTTTGGTGCAGAAGGCGCGAAATGAACTCTCAAATAAGATGGTGAAAAATGAGCTTGATTCAAAATCAATCATTGCAGTGGAGGAGAAAGCTTCAGAAAACCATGCTTCGGATGAAAGTGCTACTCTTACTAATGATGGGAATGAACTGCAGAAGACACCTGAATCAAATGGCAATAGAAAGATTTGTCGACAAGTTGCCAAAGCAAGTTCCACCTTGGGGTTAAAGGATTTTTTATTGCTCAGAAGGGTGCCATACATTTCAAAGGCTACCTCCAATCGTGCCAAGTGCTCTTCTATTTTTGTAGTTTCTGCCTTTCTAATGGTCTCATTAGTGGTCTTTACTGACATCTGCGGATATCTTAAATTCTAA 1767 0.4448 MSSVECYPSRGDDVAAVSLDSLPLGFRFRPTDEELIDYYLRQKINGNGAEVWVIREIDVCKWEPWDMPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATTHGYWKATGKDRRIKSGMMLIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNAYVLCRLFKKHDESLEVSHCDEAEQTASTPIAANYSTEEIQSGLAVVAVSPSLVTEDDKHQAIIPTHSEEAISNVITPVDCHSDGYDISDAQNNYVAPAAEEFQPWNVDMCYDPKNELLYDKLFSPVLAHIQPEFPYQPNSEPDSRYGLQYGTNETNISDFLNSVVNWDELPYEEPNCQQWSSPSFNVQNSVLSSHIDSELANMTYMQAGYAEEANDRKIPLVIAPEFCSTTGIPIDRGGGDEQKSNVELFQNSSQRAFTDYQQCSIFNAVPCGDTGIIRKTRVVQNEKLSANVTQGTAQRRIRLVQKARNELSNKMVKNELDSKSIIAVEEKASENHASDESATLTNDGNELQKTPESNGNRKICRQVAKASSTLGLKDFLLLRRVPYISKATSNRAKCSSIFVVSAFLMVSLVVFTDICGYLKF* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01259 588 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 21 252 - -
Phac9g01259 588 FunFam Nac domain-containing protein 86 31 175 - -
Phac9g01259 588 Pfam No apical meristem (NAM) protein 23 148 IPR003441 GO:0003677|GO:0006355
Phac9g01259 588 MobiDBLite consensus disorder prediction 502 522 - -
Phac9g01259 588 Gene3D NAC domain 31 176 IPR036093 GO:0003677|GO:0006355
Phac9g01259 588 ProSiteProfiles NAC domain profile. 22 172 IPR003441 GO:0003677|GO:0006355
Phac9g01259 588 SUPERFAMILY NAC domain 18 172 IPR036093 GO:0003677|GO:0006355
Phac9g01259 588 MobiDBLite consensus disorder prediction 496 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01259 Phac-Chr9 9877852 9882222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01259 14 214 NAC Transcription Factor Family AT4G35580 68.159 9.89e-92 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac9g01259 NAM 2.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01259 - - gmx:100777071 913.679