Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01233 ATGGCTCCCAAGGTTGTGCAAATGGTGGACTCTGCTGGTGATGATGAGCCTGAGAAGAAGAAGAATGAGGTTCAGACTTTGTCATTCTTCAAACTCTTGAGCTATGCTGACTTGGTAGATTGGATTCTCATGGGTTTGGGAAGTGTTGGTTCCATTGTGCATGGCATGGCACTTCCTGTGGGCTATCTCTTGTTGGGGAAAGCTCTTGATGGTTATGGAAACAATATCCAAGACATAGATGCCATGGTTAAGGCTCTTAAAAAGATTGTTCCATTTGTGTGGTATATGGCCATCGCCACATTTCCTGCTGGGATACTTGCCAGCAGCATTAATCTTCCTGACAAGTTTGAAACATGCGCAGAAATTGGTTGCTGGATGTATGCAAGTGAAAGACAGTTATTGCGGCTAAGATTAGCATATCTAAGAGCAGTCCTGAACCAAGATATAGGAGCTTTTGATACAGAGTTAACAAGTGGGAAAGTCATCAGTGGAATAAGCAAGCACATGAGTGTCATACAAGATGCCATTGGTGAGAAGTTGGGTCACTTCACCTCTAGCTGTGCAACTTTCTTTGTTGGAATTGTGATTGCTGCCATATGCTGTTGGGAAGTGACGCTTCTCTGTTTAGTGGTTGTCCCACTTATCCTTATAATTGGGGCAACTTACACCAAGAAAATGAACACCATATCAACCTCCAAAATGCTTTTCCATTCTGAAGCTACATCTATGGTAGAGCAGACAATATCACAGATAAAAACAGTTTACGCTTTTGTTGGAGAGAGCTCTGCAATCAAATCCTTTACAGAGAACATGGATAATCAATATATTATAAGCAAAGTGGAGGCAGCTGTGAAAGGAGTTGGGACAGGGATGTTGCAAACAGTGAGTTTCTGTTCTTGGGCTCTCATTGTATGGGTTGGAGCTGTTGTGGTCAGAGCAGGAAGAGCAACAGCAGGAGACATAATAGCTGCAGTGATGAGTATTCTCTTTGGTGCCATATCACTCACTTATGCAGCACCGGACATGCAAGTATTCAATCAGGCAAAAGCTGCAGGATATGAAGTTTTCCAGGTGATCCAAAGAAAGCCTCTGATAAGGAATGATTCAGAAGGGAAAATGCCTAGCAAAATCAAAGGTGATATTGACTTTCAATATGTTCACTTTTCCTACCCATCACGGCCAGACAAACCTATCCTTCAAGGACTGTCCTTGTCAATTCCAGCTGGAAAGACAGTAGCACTAGTTGGTACCAGTGGCTGTGGAAAGAGCACTGTTATCTCCCTTGTTAATAGATTTTACGATCCCTCAAGAGGAGTTATCTTTATTGATCATCACAATATCAAGGATCTTAATCTGAAGTTCCTTCGACGAAACATAGGGGTCGTTTCCCAAGAGCCATCACTTTTTGCAGGCACCATCAAGGATAACTTGAAAGTGGGGAAAATGGACGCAGATGATCAAGAGATTCAGAAGGCAGCAGTAATGTCAAATGCACACTCTTTCATATCTCAGCTGCCTAATCAGTACCTAACAGAGGTTGGAGAAAGGGGAGTCCAATTATCAGGAGGCCAAAAACAGAGAATTGCAATAGCCAGAGCTATTCTGAAAAATCCTCCCATCCTTTTGCTTGATGAAGCCACTAGCGCCCTAGATTCGGAGTCTGAAAAGCTGGTTCAAGAAGCACTTGAGACAGCTACGCAGGGAAGGACTGTCATCTTGATTGCACACAGGCTCTCAACAGTTGTAAATGCAGATATGATTGCTGTAGTCGAGAATGGACAAGTTGCGGAGACAGGAACGCACCAGAGTTTGTTAGACACAAGCACATTCTATAGTACATTATTTAGCATGCAGAACCTTGAACCAGTTCCTGAACCCAGAGCTACGATTTCAAAGAATAAAAGTGCCCGCCAAGAAGATTTTCCTATGGAAACTAGACCACCAGTAGAGGTGCAGGGAGAGGTCCAAAGAAATATTACTGAGCACTCTGTGCTAAAGGAACAAAACAAAATGAGCAGCGGAAAAAGAAATATATTTTTCAGAATTTGGTTTGGTTTGAAAAAGAGGGAGCTGGTGAAGATTTCTATTGGCTCATTTGCAGCAGCTTTCTCTGGCATCTCAAAGCCATTTTTTGGGTTCTTCATCATAACCATAGGAGTAGCATACTTTAAGGAAGATGCAAAAACGAAAGTTGGACTTTATTCAGCCATCTTCACTGCAGTAGGAATGCTTTCATTATTCAGCAACACCATCCAGCACTACTTCTTTGGAGTGGTTGGAGAAAAGGCCATGGCAAATCTCAGACGTGCTCTGTATTCAGGTCTGCTACGTAATGAAGTAGGTTGGTTTGACAAATCAGAGAATACTGTTGGTTCATTGACTTCACGCATTATCAGTGACACTGCTATGGTCAAAGTCATCATTGCTGATCGAATGTCTATGATCCTGCAATGTGTTTCCTCCATACTGATAGCAACAGTTGTCAGCATGGCTGTCAACTGGAGAATGAGTTTGGTAGCTTGGTCTGTGATGCCCTGCCACTTCATAGGTGGTCTTATTCAAGCCAAGTCTGCCAAAGGATTTTCTGGTGACTACTCTGCTGCACATTCTGAGCTTGTTACTCTTGCATCCGAGTCCACAACCAACATAAGGACTATTGCCTCATTTTGTCATGAAGAACAAGTAATGAGGAAAGCCAAAATATCCCTGGAAATTCCAAAGAAAAAGTATAGGAAAGAAAGTATCAAATATGGGATCATTCAAGGCTTCTCCCTTTGCTTATGGAACATTGCACATGCTGTTGCTCTGTGGTACACAACAATTCTGGTTGACAGACGTCAAGCCAGCTTTGAAAATGGAATAAGATCGTACCAAATTTTTTCTCTCACAGTTCCTTCTATCACAGAATTATACACACTGATCCCAGCTGTCATCTCTGCTATCAATATACTGACCCCAGCATTCAAAACCCTTGATCGTAAAACACAAATTGAACCAGACACACCAGATGATTCACAACCAGAGAGGATCCAAGGAAATGTAGAGTTTGAAAATGTAAAATTCTACTACCCTTCAAGACCAGAAGTCACTGTTCTTGATAATTTCAGTTTGCAAATTGAAGCTGGATTGAAGGTGGCTTTCGTAGGACCAAGTGGAGCTGGAAAATCCTCTGTTTTGGCCCTTTTACTAAGATTTCATGATCCACAGGGAGGAAAGGTATTAATTGATAAGAAAGACATACGGAAATATAATCTAAGATGGTTAAGGACACAAATAGGACTAGTACAACAAGAACCACTGCTCTTTAATTGCTCAATTAGAGACAACATTTGCTATGGCCATAATGGGGCTTCTGAAAGTGAAATGGTAGAGGTTGCTAAAGAAGCAAACATACATGAATTTGTAAGTAATCTACCAAATGGATATAGCACTGTTGTTGGAGAGAAAGGCTGCCAGCTTTCCGGAGGTCAAAAGCAAAGAATAGCCATTGCCAGAACAATACTAAAGAAGCCTGCAATTTTACTCCTTGATGAAGCAACAAGTGCTCTTGATGCTGAGTCAGAAGGAATTATAGTAAATGCTTTAAACACAATACATCTGAAGGAAGAGAGTGGCTTGCGTTCAAAAACCACCCGGATAACAGTAGCTCATAGGCTTTCCACAGTGATAAACTCAGATACTATAATTGCCATGGACAAAGGTAAACTTGTACAGATGGGTTCCCACTCAACCCTAATAGCAGCAGAGTCAGGACTTTATTCGAGGATGTTCAGGTTACAGAGCTTTGAAGAAACTTCATAG 3801 0.4175 MAPKVVQMVDSAGDDEPEKKKNEVQTLSFFKLLSYADLVDWILMGLGSVGSIVHGMALPVGYLLLGKALDGYGNNIQDIDAMVKALKKIVPFVWYMAIATFPAGILASSINLPDKFETCAEIGCWMYASERQLLRLRLAYLRAVLNQDIGAFDTELTSGKVISGISKHMSVIQDAIGEKLGHFTSSCATFFVGIVIAAICCWEVTLLCLVVVPLILIIGATYTKKMNTISTSKMLFHSEATSMVEQTISQIKTVYAFVGESSAIKSFTENMDNQYIISKVEAAVKGVGTGMLQTVSFCSWALIVWVGAVVVRAGRATAGDIIAAVMSILFGAISLTYAAPDMQVFNQAKAAGYEVFQVIQRKPLIRNDSEGKMPSKIKGDIDFQYVHFSYPSRPDKPILQGLSLSIPAGKTVALVGTSGCGKSTVISLVNRFYDPSRGVIFIDHHNIKDLNLKFLRRNIGVVSQEPSLFAGTIKDNLKVGKMDADDQEIQKAAVMSNAHSFISQLPNQYLTEVGERGVQLSGGQKQRIAIARAILKNPPILLLDEATSALDSESEKLVQEALETATQGRTVILIAHRLSTVVNADMIAVVENGQVAETGTHQSLLDTSTFYSTLFSMQNLEPVPEPRATISKNKSARQEDFPMETRPPVEVQGEVQRNITEHSVLKEQNKMSSGKRNIFFRIWFGLKKRELVKISIGSFAAAFSGISKPFFGFFIITIGVAYFKEDAKTKVGLYSAIFTAVGMLSLFSNTIQHYFFGVVGEKAMANLRRALYSGLLRNEVGWFDKSENTVGSLTSRIISDTAMVKVIIADRMSMILQCVSSILIATVVSMAVNWRMSLVAWSVMPCHFIGGLIQAKSAKGFSGDYSAAHSELVTLASESTTNIRTIASFCHEEQVMRKAKISLEIPKKKYRKESIKYGIIQGFSLCLWNIAHAVALWYTTILVDRRQASFENGIRSYQIFSLTVPSITELYTLIPAVISAINILTPAFKTLDRKTQIEPDTPDDSQPERIQGNVEFENVKFYYPSRPEVTVLDNFSLQIEAGLKVAFVGPSGAGKSSVLALLLRFHDPQGGKVLIDKKDIRKYNLRWLRTQIGLVQQEPLLFNCSIRDNICYGHNGASESEMVEVAKEANIHEFVSNLPNGYSTVVGEKGCQLSGGQKQRIAIARTILKKPAILLLDEATSALDAESEGIIVNALNTIHLKEESGLRSKTTRITVAHRLSTVINSDTIIAMDKGKLVQMGSHSTLIAAESGLYSRMFRLQSFEETS* 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01233 1266 Pfam ABC transporter 399 548 IPR003439 GO:0005524
Phac9g01233 1266 CDD ABC_MTABC3_MDL1_MDL2 1014 1260 - -
Phac9g01233 1266 Pfam ABC transporter 1032 1181 IPR003439 GO:0005524
Phac9g01233 1266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1006 1260 IPR027417 -
Phac9g01233 1266 FunFam ABC transporter B family member 1 1004 1261 - -
Phac9g01233 1266 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1014 1258 IPR003439 GO:0005524
Phac9g01233 1266 SMART AAA_5 1041 1235 IPR003593 GO:0016887
Phac9g01233 1266 SMART AAA_5 408 600 IPR003593 GO:0016887
Phac9g01233 1266 CDD ABC_MTABC3_MDL1_MDL2 381 618 - -
Phac9g01233 1266 FunFam ABC transporter B family member 4 371 625 - -
Phac9g01233 1266 Gene3D - 371 619 IPR027417 -
Phac9g01233 1266 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 696 979 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac9g01233 1266 ProSitePatterns ABC transporters family signature. 520 534 IPR017871 GO:0005524|GO:0016887
Phac9g01233 1266 ProSitePatterns ABC transporters family signature. 1153 1167 IPR017871 GO:0005524|GO:0016887
Phac9g01233 1266 SUPERFAMILY ABC transporter transmembrane region 31 363 IPR036640 GO:0005524|GO:0016020
Phac9g01233 1266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 372 618 IPR027417 -
Phac9g01233 1266 Gene3D - 1004 1265 IPR027417 -
Phac9g01233 1266 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 381 617 IPR003439 GO:0005524
Phac9g01233 1266 Pfam ABC transporter transmembrane region 47 332 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac9g01233 1266 Pfam ABC transporter transmembrane region 696 958 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac9g01233 1266 SUPERFAMILY ABC transporter transmembrane region 685 1002 IPR036640 GO:0005524|GO:0016020
Phac9g01233 1266 CDD ABC_6TM_Pgp_ABCB1_D1_like 44 355 - -
Phac9g01233 1266 CDD ABC_6TM_Pgp_ABCB1_D2_like 684 997 - -
Phac9g01233 1266 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 46 347 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac9g01233 1266 Gene3D ABC transporter type 1, transmembrane domain 31 975 IPR036640 GO:0005524|GO:0016020
Phac9g01233 1266 PANTHER ABC TRANSPORTER B FAMILY 11 745 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01233 Phac-Chr9 9701347 9710530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01233 18 1265 Calmodulin-binding Proteins AT2G36910 40.689 0.0 944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01233 K05658 - zju:107414909 1771.9