Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01200 ATGGAATCGTCGCCGTCGTCTTCGTCCTCGTTGTCGTCGTCTTCTGGAAGCGATGCCAGCGGTGGTGCCGCTGTCACGTGGCTCGGGATGAGTTTCCCGTTCCGTTCTCCGCTCTCTCTCGTGATGGATTACTGCACGCGTGAGGATTCCGCAGAGCCTGTGATTATCATTCCCCGGACGCGCCCGCGGTTTCAGGCGCCGGCTGAATCTGTTGCTTCTGCTTCGGCCTCTGATTCTGGCGATAATGCGTGCAGCGGCGCTGAGGAGGTTGCGATACGCATCATTGGGTCTGGCGAGCAAGACAGCGGCTCGTCGCCGTCGTCATCGAGGAGCCGCGGTGGGGAACCGGGCTGTGAGGAGGCGGCGGTGGTTGGGAGGGGCGGGATGCTGTCGTCGGAGGCTCGCCGGCGAATGGCTGAGGAAAGGGTGCCGTTGGTGTCTTTGGATGATGGGATTGGTGGCGGTAGGGATTCTTCTTCGTCTTCCTCTACCTACCAGAGGTATGATATTCAGCAGGTTGCGAAGTGGATTGAACAGATTCTTCCATTCTCTCTCTTGCTGTTGATTGTTTTCATCCGCCAGCATTTGCAAGGTTTCTTTGTCACAATTTGTATATCAGCTGTGATGTTCAAGTCAAATGAAATTGTTAAGAAGCAGACTGCCCTGAAGGGAGATCGGAAAGTCTCTGTTCTTCTCAGTATCTCTTTTGCCTTTATGCTGCATGTTATATGCATTTACTGGTGGTATCGAAATGATGATCTTTTATACCCACTGGCCATGCTTCCACCGAAGACAACTCCACCTTTCTGGCATACCATATTCATCATTTTGGTTAATGATACATTGGTGCGGCAAGCAGCAATGGCTTTGAAGTGTTTATTGCTTATTTACTACAAAAATGGAAGAGGCCATAACTTTCGTCGGCAGGGTCAAATGTTAACTCTGATTGAGTACACTCTGCTGCTGTATCGTGCCTTGTTGCCAACACCAGTTTGGTACCGATTTTTCTTGAACAAGGATTATGGAAGTCTGTTTTCCTCACTGACCACAGGATTGTATCTAACTTTCAAGCTAACATCAGTAGTTGAGAAGGTCCAATGCTTTGCTTCTGCCTTAAAAGCATTATCAAAAAAGGAAGTTCATTATGGGGTTTATGCCACAACGGAACAGGTGAGTGCCGCCGGTGACATGTGTGCTATATGCCAAGAGAAGATGCAGGCTCCCATATTGTTGAGCTGCAAACACATGTTCTGTGAGGAGTGTGTATCTGAATGGTTTGAGAGAGAACGGACTTGCCCGTTATGCAGGGCATTGGTAAAACCAGCTGATCTTCGGACCTTTGGAGATGGATCGACAAGTCTGTTTTTTCAGCTGTTTTAA 1380 0.492 MESSPSSSSSLSSSSGSDASGGAAVTWLGMSFPFRSPLSLVMDYCTREDSAEPVIIIPRTRPRFQAPAESVASASASDSGDNACSGAEEVAIRIIGSGEQDSGSSPSSSRSRGGEPGCEEAAVVGRGGMLSSEARRRMAEERVPLVSLDDGIGGGRDSSSSSSTYQRYDIQQVAKWIEQILPFSLLLLIVFIRQHLQGFFVTICISAVMFKSNEIVKKQTALKGDRKVSVLLSISFAFMLHVICIYWWYRNDDLLYPLAMLPPKTTPPFWHTIFIILVNDTLVRQAAMALKCLLLIYYKNGRGHNFRRQGQMLTLIEYTLLLYRALLPTPVWYRFFLNKDYGSLFSSLTTGLYLTFKLTSVVEKVQCFASALKALSKKEVHYGVYATTEQVSAAGDMCAICQEKMQAPILLSCKHMFCEECVSEWFERERTCPLCRALVKPADLRTFGDGSTSLFFQLF* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01200 459 MobiDBLite consensus disorder prediction 1 21 - -
Phac9g01200 459 ProSitePatterns Zinc finger RING-type signature. 413 422 IPR017907 -
Phac9g01200 459 SMART ring_2 398 435 IPR001841 -
Phac9g01200 459 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 34 459 IPR044235 GO:0061630|GO:1904294
Phac9g01200 459 Pfam Zinc finger, C3HC4 type (RING finger) 396 439 - -
Phac9g01200 459 ProSiteProfiles Zinc finger RING-type profile. 398 436 IPR001841 -
Phac9g01200 459 MobiDBLite consensus disorder prediction 1 22 - -
Phac9g01200 459 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 373 446 IPR013083 -
Phac9g01200 459 SUPERFAMILY RING/U-box 388 441 - -
Phac9g01200 459 MobiDBLite consensus disorder prediction 96 122 - -
Phac9g01200 459 CDD RING-HC_RNFT1-like 396 436 - -
Phac9g01200 459 MobiDBLite consensus disorder prediction 98 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01200 Phac-Chr9 9542442 9550341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01200 59 459 C3H Transcription Factor Family AT5G01960 67.246 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01200 - K22379 gmx:100784614 749.199