Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01192 ATGAAGTTACAGTTCTGTATTGTTGGACTTATTCTATTAGGCTCCACACTGTCTCTGTGTGGCCTGATAGTAGCTGACTTGAAGTCTGACCAACAAGCTCTGTTGGAATTTGCTTCAAGTGTCCCACATGCCCCAAGGCTCAACTGGAAGAATGACTCTGCTTCAATTTGCACCTCGTGGGTTGGTGTGACATGCAACTCAAATGGCACACGTGTCATAGGCCTTCACCTTCCAGGAATGGGATTCACTGGGACCATTCAAGAGAACAGCATAGGAAAACTAGATGCTCTTAGGATCCTGAGTCTTCATTCCAATGGCCTTAGAGGAAATCTTCCTTCTAACATCCTCTCCATTCCTTCACTCCAATTTGTATACCTTCAGCACAATAGCTTCTCTGGCGCAATTCCTTCTCCTGTGTCCCCTAAACTCTTTGCATTGGATATTTCCTTTAACTCCTTTTCTGGCAGCATCCCACCTGCATTTCAGAATCTGAGAAGACTCACTTGGTTGTATCTCCAAAACAATTCCATATCTGGGGCTATTCCTGACTTCAACCTTCCAAGGCTCAAACATTTGAACTTGAGTTACAATAACTTGAATGGCTCAATTCCAAATTCCATAAAGACATTCCCTTATTCCTCTTTTGTCGGGAACTCTCTCTTATGTGGGCCACCACTAAATGATTGCTCTACAATCTCCCCTTCTCCATCTGCTTCCACTGATGATTACCAGCCACTCACTCCACCAACCGTCCAAAACCAAAAGGGTACCAACCATAAGAAAAGCTTTGGTCTGGCTACTGTCCTTGCTCTAGTCATTGGGGTCTTAGCCGTCCTCTCTCTACTAGTTGTAGCGATCTGTGTGTTCTGTTTGAAGAGGAAGAAAAACAGTAAAAGCAGTGGTGGCATACTGAAAGGAAAGGCTTCATGCGCTGGAAAGACAGAGGTTTCAAAGAGTTTCGGGAGTGGGGTGCAAGGGGCTGAGAAAAACAAACTATTTTTCTTTGAAGGTTCCTCTTCTAGCTTTGACCTTGAGGATTTGCTGAAGGCTTCAGCTGAAGTTCTTGGAAAAGGAAGTTATGGAACAGCATACAAGGCTGTTTTGGAGGAGGGAACAACAGTGGTAGTCAAAAGGTTGAAAGAAGTTGTGGTAGGAAAGAAGGAGTTTGAGCAGCATTTGGAGATTGTGGGGAGATTTGGAAGCCACCCAAATGTGATGCCCCTAAGAGCTTATTACTATTCCAAAGATGAAAAACTTCTGGTTTACAATTACATGCCAGGTGGAAGCTTGTTTTTCTTGTTGCACGGAAACAAGGGTGCAGGAAGAACCCCACTAGACTGGGATTCCAGAGTGAAGATTGTGCATGGAGCTGCCAAGGGAATTGCTTTCATCCACTCCGAGGGAGGTCCTAAATTCACACATGGCAACATCAAGTCAAACAATGTGCTCATAAGCCAAGAACTAGACGGCTGCATCTCTGATGTTGGATTGCCACCTCTAATGAACACCCCAGCAACCATGTCTAGAAGCAATGGCTACAGAGCTCCAGAAGTCACTGACTCAAAGAAGATCACTCAGAAGTCTGATGTATACAGCTTTGGTGTGGTGCTGCTTGAAATGCTGACAGGGAAGACCCCTCTGAGGTATCCAGGGTATGAGGATGTGGTTGATCTTCCAAGGTGGGTGAGATCTGTTGTTAGGGAGGAATGGACTGCAGAAGTGTTTGATGAGGAGCTTCTGAGAGGACAATATGTTGAAGAGGAAATGGTGCAGATGCTTCAGATTGCATTAGCATGTGTGGCTAAGGGGTCAGAAAATAGGCCTAGAATGGATGAAGTTGCTAGAATGATTGAGGAAATTAAGCATCCTGAGTTGAAGAACCGGCCATCCTCTGAGTCTGAGTCAAATGTGCACACACCATGA 1923 0.4498 MKLQFCIVGLILLGSTLSLCGLIVADLKSDQQALLEFASSVPHAPRLNWKNDSASICTSWVGVTCNSNGTRVIGLHLPGMGFTGTIQENSIGKLDALRILSLHSNGLRGNLPSNILSIPSLQFVYLQHNSFSGAIPSPVSPKLFALDISFNSFSGSIPPAFQNLRRLTWLYLQNNSISGAIPDFNLPRLKHLNLSYNNLNGSIPNSIKTFPYSSFVGNSLLCGPPLNDCSTISPSPSASTDDYQPLTPPTVQNQKGTNHKKSFGLATVLALVIGVLAVLSLLVVAICVFCLKRKKNSKSSGGILKGKASCAGKTEVSKSFGSGVQGAEKNKLFFFEGSSSSFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLKEVVVGKKEFEQHLEIVGRFGSHPNVMPLRAYYYSKDEKLLVYNYMPGGSLFFLLHGNKGAGRTPLDWDSRVKIVHGAAKGIAFIHSEGGPKFTHGNIKSNNVLISQELDGCISDVGLPPLMNTPATMSRSNGYRAPEVTDSKKITQKSDVYSFGVVLLEMLTGKTPLRYPGYEDVVDLPRWVRSVVREEWTAEVFDEELLRGQYVEEEMVQMLQIALACVAKGSENRPRMDEVARMIEEIKHPELKNRPSSESESNVHTP* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01192 640 SUPERFAMILY Protein kinase-like (PK-like) 353 620 IPR011009 -
Phac9g01192 640 FunFam pollen receptor-like kinase 1 317 424 - -
Phac9g01192 640 FunFam Leucine-rich repeat receptor-like protein kinase 140 229 - -
Phac9g01192 640 Pfam Leucine Rich Repeat 144 164 IPR001611 GO:0005515
Phac9g01192 640 Gene3D Phosphorylase Kinase; domain 1 315 424 - -
Phac9g01192 640 ProSiteProfiles Protein kinase domain profile. 349 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01192 640 Pfam Protein kinase domain 353 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac9g01192 640 Gene3D Transferase(Phosphotransferase) domain 1 425 638 - -
Phac9g01192 640 Pfam Leucine Rich repeats (2 copies) 166 204 IPR025875 -
Phac9g01192 640 ProSitePatterns Protein kinases ATP-binding region signature. 355 386 IPR017441 GO:0005524
Phac9g01192 640 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 425 631 - -
Phac9g01192 640 PANTHER OS05G0588300 PROTEIN 17 632 - -
Phac9g01192 640 MobiDBLite consensus disorder prediction 620 640 - -
Phac9g01192 640 SUPERFAMILY L domain-like 39 227 - -
Phac9g01192 640 MobiDBLite consensus disorder prediction 234 257 - -
Phac9g01192 640 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Phac9g01192 640 Gene3D Ribonuclease Inhibitor 23 90 IPR032675 -
Phac9g01192 640 Gene3D Ribonuclease Inhibitor 91 234 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01192 Phac-Chr9 9498615 9503832 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01192 3 635 Receptor kinase-like Gene Family AT5G58300 59.213 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac9g01192 Pkinase 1.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01192 - - gmx:100818444 1117.83